RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TADA2AO75478 443 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 APOA4P06727 396 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 STMN1P16949 149 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 APOFQ13790 326 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 SEPT6Q14141 434 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 FICDQ9BVA6 458 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 NOL11Q9H8H0 719 aaKnown RBP17.08■□□□□ 0.33
RTN1-201ENST00000267484 CRTAC1Q9NQ79 661 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 VTI1BQ9UEU0 232 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 VPS28Q9UK41 221 aa17.08■□□□□ 0.33
RTN1-201ENST00000267484 MYBPHLA2RUH7 354 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 C9JVG2 144 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 TRIM38O00635 465 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 SULT2A1Q06520 285 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 ZNF470Q6ECI4 717 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 ITPRIPL1Q6GPH6 555 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.32
RTN1-201ENST00000267484 HDAC11Q96DB2 347 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 ZNF560Q96MR9 790 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 GDAP2Q9NXN4 497 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 ANKRD6Q9Y2G4 727 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 YWHAQP27348 245 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 CCNA1P78396 465 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 GALNT2Q10471 571 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 RDH11Q8TC12 318 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 RNF34Q969K3 372 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 SLCO4A1Q96BD0 722 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.32
RTN1-201ENST00000267484 CCT7Q99832 543 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 SMOQ99835 787 aa17.08■□□□□ 0.32
RTN1-201ENST00000267484 FBRSL1Q9HCM7 1045 aaKnown RBP17.08■□□□□ 0.32
RTN1-201ENST00000267484 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 MAGEB16A2A368 324 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 CDK4P11802 303 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 DAOAP59103 153 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 CLEC6AQ6EIG7 209 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 DNAJB3Q8WWF6 145 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 KIFC1Q9BW19 673 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 SLC2A11Q9BYW1 496 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 WDCPQ9H6R7 721 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 IL1RL2Q9HB29 575 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 DMTF1Q9Y222 760 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 ZSWIM8A7E2V4 1837 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 ARHGEF37A1IGU5 675 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 CCL22O00626 93 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 TMCC1O94876 653 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 CD4P01730 458 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 FAM200BP0CF97 657 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 SMPD1P17405 629 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 AFF1P51825 1210 aaKnown RBP17.07■□□□□ 0.32
RTN1-201ENST00000267484 TRIM25Q14258 630 aaKnown RBP17.07■□□□□ 0.32
RTN1-201ENST00000267484 NAPEPLDQ6IQ20 393 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 PKN3Q6P5Z2 889 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 HERC6Q8IVU3 1022 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
RTN1-201ENST00000267484 PPWD1Q96BP3 646 aaKnown RBP17.07■□□□□ 0.32
RTN1-201ENST00000267484 SLC45A3Q96JT2 553 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 TMEM79Q9BSE2 394 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 SFMBT1Q9UHJ3 866 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 CEPT1Q9Y6K0 416 aa17.07■□□□□ 0.32
RTN1-201ENST00000267484 TIPRLO75663 272 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 PRAMEP78395 509 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 IKBKEQ14164 716 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 FASTKQ14296 549 aaKnown RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 REP15Q6BDI9 236 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 CHERPQ8IWX8 916 aaKnown RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 TRIML2Q8N7C3 387 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 TSPAN14Q8NG11 270 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 DLG3Q92796 817 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 MRPL46Q9H2W6 279 aaKnown RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 CACNA2D2Q9NY47 1150 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 BCAP29Q9UHQ4 241 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 ZNF839A8K0R7 811 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 CDH2P19022 906 aaPredicted RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 UGT1A6P19224 532 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 GALK1P51570 392 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 PCSK7Q16549 785 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 NUP93Q8N1F7 819 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 ASB9Q96DX5 294 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 LRCH3Q96II8 777 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 GIMAP2Q9UG22 337 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 TRHDEQ9UKU6 1024 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 CROCCQ5TZA2 2017 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 ERI2A8K979 691 aaKnown RBP17.06■□□□□ 0.32
RTN1-201ENST00000267484 SOX11P35716 441 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 SCNN1BP51168 640 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 COG7P83436 770 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 HPCAP84074 193 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 HERC3Q15034 1050 aa17.06■□□□□ 0.32
RTN1-201ENST00000267484 SV2CQ496J9 727 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms