RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 APOA1P02647 267 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 ATP5BP06576 529 aaKnown RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 FAM83AQ86UY5 434 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 YIPF2Q9BWQ6 316 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 PDGFCQ9NRA1 345 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 RGS18Q9NS28 235 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 UBQLN1Q9UMX0 589 aaKnown RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 PCDHGC3Q9UN70 934 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 LRP6O75581 1613 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 KANSL1LA0AUZ9 987 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 E7ENX8 843 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 RECQL4O94761 1208 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 ETV4P43268 484 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 INPP1P49441 399 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 ITGA7Q13683 1181 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 PCLAFQ15004 111 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 MBLAC2Q68D91 279 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 PGAM4Q8N0Y7 254 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 OR6J1Q8NGC5 347 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 OCEL1Q9H607 264 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 DDX43Q9NXZ2 648 aaKnown RBP17.27■□□□□ 0.35
SRF-201ENST00000265354 TIMM22Q9Y584 194 aa17.27■□□□□ 0.35
SRF-201ENST00000265354 RBP1P09455 135 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 FGF3P11487 239 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 XIAPP98170 497 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 VAC14Q08AM6 782 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 NR6A1Q15406 480 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 RGS21Q2M5E4 152 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 ZRANB3Q5FWF4 1079 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 ESRP1Q6NXG1 681 aaKnown RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 TAF2Q6P1X5 1199 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 CTU1Q7Z7A3 348 aaKnown RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 FTHL17Q9BXU8 183 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 SPATC1LQ9H0A9 340 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 ARHGEF4Q9NR80 690 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 ITGB1BP2Q9UKP3 347 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 RAB26Q9ULW5 256 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 PMM2O15305 246 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 KCNH1O95259 989 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 GUCA1CO95843 209 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 CDH3P22223 829 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 SERPINB10P48595 397 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 RAB10P61026 200 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 TIGD2Q4W5G0 525 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 RSBN1Q5VWQ0 802 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 ZNF280DQ6N043 979 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 OGFOD2Q6N063 350 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 FAM126BQ8IXS8 530 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 PTGR2Q8N8N7 351 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 STN1Q9H668 368 aaKnown RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 CASS4Q9NQ75 786 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 DNAJC28Q9NX36 388 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 GIMAP2Q9UG22 337 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 FBXO9Q9UK97 447 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 SYNCRIPO60506 623 aaKnown RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 ARL2P36404 184 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 TRIM25Q14258 630 aaKnown RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 WSCD1Q658N2 575 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 NOTUMQ6P988 496 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 GALNT18Q6P9A2 607 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 TNIP2Q8NFZ5 429 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 C6orf62Q9GZU0 229 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 IL22Q9GZX6 179 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 ABCG8Q9H221 673 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 MINDY3Q9H8M7 445 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 FETUBQ9UGM5 382 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 ZMYM5Q9UJ78 669 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 CAB39Q9Y376 341 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 H6PDO95479 791 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 CD4P01730 458 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 LMO2P25791 158 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 TCEAL1Q15170 157 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 SPESP1Q6UW49 350 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 RBM12BQ8IXT5 1001 aaKnown RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 TCF12Q99081 682 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 RBBP8Q99708 897 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 PNMA8BQ9ULN7 279 aaPredicted RBP17.26■□□□□ 0.35
SRF-201ENST00000265354 CARD8Q9Y2G2 431 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 NUMBLQ9Y6R0 609 aa17.26■□□□□ 0.35
SRF-201ENST00000265354 TP73O15350 636 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 SH3BGRLO75368 114 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 PABPC4LP0CB38 370 aaKnown RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 PTPRAP18433 802 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 ATP5F1P24539 256 aaPredicted RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 ADSLP30566 484 aaPredicted RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 HPCAP84074 193 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 LSAMPQ13449 338 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 TMEM214Q6NUQ4 689 aaKnown RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 WNT8BQ93098 351 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 HAPLN2Q9GZV7 340 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 ABCB10Q9NRK6 738 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 OLA1Q9NTK5 396 aaKnown RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 ABI2Q9NYB9 513 aaPredicted RBP17.25■□□□□ 0.35
SRF-201ENST00000265354 CACNG4Q9UBN1 327 aa17.25■□□□□ 0.35
SRF-201ENST00000265354 RABL2BQ9UNT1 228 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms