RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CYP4V2Q6ZWL3 525 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 USP43Q70EL4 1123 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 UNC5BQ8IZJ1 945 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 TNS4Q8IZW8 715 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 Q8N9G6 341 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 OR7G1Q8NGA0 311 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 CYGBQ8WWM9 190 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 FEM1CQ96JP0 617 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 MARK4Q96L34 752 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ILKAPQ9H0C8 392 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 GPN2Q9H9Y4 310 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 ZNF358Q9NW07 568 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 RIPK3Q9Y572 518 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 A0A0G2JMZ2 1700 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 TCAF2A6NFQ2 919 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 HDAC3O15379 428 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 GUCY1B2O75343 617 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 MAFO75444 373 aaPredicted RBP13.26□□□□□ -0.29
NUP54-201ENST00000264883 MICAL2O94851 1124 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 ENO2P09104 434 aaPredicted RBP13.26□□□□□ -0.29
NUP54-201ENST00000264883 CHRNB1P11230 501 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 RBL1P28749 1068 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 GMPRP36959 345 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 RAD23AP54725 363 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 TFAMQ00059 246 aaKnown RBP13.26□□□□□ -0.29
NUP54-201ENST00000264883 TRAP1Q12931 704 aaKnown RBP13.26□□□□□ -0.29
NUP54-201ENST00000264883 TAF5Q15542 800 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 INAVAQ3KP66 663 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 IER5Q5VY09 327 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 SEL1L3Q68CR1 1132 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 DSG4Q86SJ6 1040 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 ELMOD1Q8N336 334 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 RAB2BQ8WUD1 216 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 AFG1LQ8WV93 481 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 NAT9Q9BTE0 207 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 WDR12Q9GZL7 423 aaKnown RBP13.26□□□□□ -0.29
NUP54-201ENST00000264883 ADAMTS10Q9H324 1103 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 RMND5AQ9H871 391 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 DNMT3BQ9UBC3 853 aaKnown RBP13.26□□□□□ -0.29
NUP54-201ENST00000264883 KIAA1257Q9ULG3 409 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 PCDHGA7Q9Y5G6 932 aa13.26□□□□□ -0.29
NUP54-201ENST00000264883 E7ENX8 843 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MDM4O15151 490 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 CLOCKO15516 846 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 CPNE6O95741 557 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 CLIC3O95833 236 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MPSTP25325 297 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 TYK2P29597 1187 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 ATICP31939 592 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 NR2C2P49116 596 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 TNK2Q07912 1038 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 PPIL2Q13356 520 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 BFSP2Q13515 415 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
NUP54-201ENST00000264883 TMEM132BQ14DG7 1078 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 STILQ15468 1287 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 SEZ6Q53EL9 994 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 CHST15Q7LFX5 561 aaPredicted RBP13.25□□□□□ -0.29
NUP54-201ENST00000264883 ZBTB33Q86T24 672 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 ANKRD13AQ8IZ07 590 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 TMEM176AQ96HP8 235 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 FBXL20Q96IG2 436 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 FAM167AQ96KS9 214 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MUC3BQ9H195 1237 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MOV10Q9HCE1 1003 aaKnown RBP13.25□□□□□ -0.29
NUP54-201ENST00000264883 TJP2Q9UDY2 1190 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 HEATR9A2RTY3 570 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 M0QYV0 167 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 PRKCBP05771 671 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 PDGFRAP16234 1089 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 ENDOUP21128 410 aaKnown RBP13.25□□□□□ -0.29
NUP54-201ENST00000264883 GPD2P43304 727 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 PSMD8P48556 350 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 SEMA5AQ13591 1074 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
NUP54-201ENST00000264883 MPZL3Q6UWV2 235 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 ERO1BQ86YB8 467 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 SNX29P2Q8IUI4 249 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 OFCC1Q8IZS5 231 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 STON2Q8WXE9 905 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 FAR2Q96K12 515 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 APBA2Q99767 749 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 SH3GL1Q99961 368 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 HOXD1Q9GZZ0 328 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 ACAD9Q9H845 621 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 FANCEQ9HB96 536 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 MORF4L1Q9UBU8 362 aa13.25□□□□□ -0.29
NUP54-201ENST00000264883 A0A0G2JLL6 359 aaPredicted RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RGS13O14921 159 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 CILPO75339 1184 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 H2AFYO75367 372 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 SEC14L2O76054 403 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 GARSP41250 739 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms