RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 GPR156Q8NFN8 814 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 OR52L1Q8NGH7 329 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 STAG3L4Q8TBR4 150 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 A0A0A0MRY4 1105 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 TRIM38O00635 465 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 PUDPQ08623 228 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 LNX1Q8TBB1 728 aaPredicted RBP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 PPP1R13LQ8WUF5 828 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 CERS2Q96G23 380 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 SPATA13Q96N96 652 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 RPN2P04844 631 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 ABATP80404 500 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 SPIBQ01892 262 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 PAGE2BQ5JRK9 111 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 FAM220AQ7Z4H9 259 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 RCN3Q96D15 328 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 AHCYL2Q96HN2 611 aaKnown RBP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 QKIQ96PU8 341 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 GALNT8Q9NY28 637 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 SNX6Q9UNH7 406 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 TRUB2O95900 331 aaKnown RBP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 IRF8Q02556 426 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 PPP3CAQ08209 521 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 RAP1GAP2Q684P5 730 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 TNS4Q8IZW8 715 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 SMYD1Q8NB12 490 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 CLIP3Q96DZ5 547 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 ELOVL4Q9GZR5 314 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 OR12D3Q9UGF7 316 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 LIN7AO14910 233 aaPredicted RBP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 NKRFO15226 690 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL5A3-201ENST00000264828 CASP5P51878 434 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 USP45Q70EL2 814 aa18.14■□□□□ 0.49
COL5A3-201ENST00000264828 MYBL2P10244 700 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 RPL22P35268 128 aaKnown RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 SLC26A3P40879 764 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 STAT5AP42229 794 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 BST1Q10588 318 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 MYDGFQ969H8 173 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 KCNQ5Q9NR82 932 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 TMEM51Q9NW97 253 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 TNPO3Q9Y5L0 923 aaKnown RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 MAP2K7O14733 419 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 SP100P23497 879 aaPredicted RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 ADSLP30566 484 aaPredicted RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 MARCKSL1P49006 195 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 PEG10Q86TG7 708 aaKnown RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 ZHX1-C8orf76Q96EF9 292 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 RSL24D1Q9UHA3 163 aaKnown RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 RTN3O95197 1032 aaPredicted RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 ANXA5P08758 320 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 PFKPQ01813 784 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 MYLPFQ96A32 169 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 LEF1Q9UJU2 399 aaPredicted RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 TEX28O15482 410 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 PLOD3O60568 738 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 LRATO95237 230 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 TFEBP19484 476 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 MAPKAPK3Q16644 382 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 C10orf107Q8IVU9 208 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 NETO2Q8NC67 525 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 NELL1Q92832 810 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 COMMD9Q9P000 198 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 EGFL7Q9UHF1 273 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 GNPTGQ9UJJ9 305 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 RPS6KA6Q9UK32 745 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 RGSL1A5PLK6 1076 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 EPHA3P29320 983 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 ZC3H12AQ5D1E8 599 aaKnown RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 PCSK9Q8NBP7 692 aaKnown RBP18.13■□□□□ 0.49
COL5A3-201ENST00000264828 ASB8Q9H765 288 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 FZD1Q9UP38 647 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 PCDHGC5Q9Y5F6 944 aa18.13■□□□□ 0.49
COL5A3-201ENST00000264828 PSIP1O75475 530 aaKnown RBP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HIST1H2ABP04908 130 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 CYP1A2P05177 515 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 DRD4P21917 467 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HIST3H2AQ7L7L0 130 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 MAP4K3Q8IVH8 894 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HOMEZQ8IX15 550 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 EPS8L1Q8TE68 723 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HIST1H2ACQ93077 130 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 ASB7Q9H672 318 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 TMCC2O75069 709 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HNRNPLP14866 589 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 TNFRSF8P28908 595 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HNF4AP41235 474 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 INSCQ1MX18 579 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 STK40Q8N2I9 435 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 CDYL2Q8N8U2 506 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 VAT1Q99536 393 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 ACKR2O00590 384 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 CHPFQ8IZ52 775 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 SLC47A1Q96FL8 570 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 KANSL3Q9P2N6 904 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 ZMYM2Q9UBW7 1377 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms