RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 THEGLP0DJG4 465 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 EPHA8P29322 1005 aaPredicted RBP16.31■□□□□ 0.2
USE1-201ENST00000263897 HCAR3P49019 387 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 RHOAP61586 193 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 GDPD4Q6W3E5 623 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 VPS36Q86VN1 386 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 NETO2Q8NC67 525 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 KCTD15Q96SI1 283 aaPredicted RBP16.31■□□□□ 0.2
USE1-201ENST00000263897 C1QTNF2Q9BXJ5 285 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 FZD3Q9NPG1 666 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 TDRD6O60522 2096 aaKnown RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 PTPRBP23467 1997 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 A0A087X0T9 212 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 GOLGA8CPA6NN73 597 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 J3KR12 359 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 PRAMEF11O60813 436 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 IGSF6O95976 241 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 FAM228BP0C875 321 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 ERCC2P18074 760 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 PCK1P35558 622 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 ABL2P42684 1182 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 ZNF135P52742 658 aaPredicted RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 CLDN2P57739 230 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 FGL2Q14314 439 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 PPP6R3Q5H9R7 873 aaPredicted RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 KANSL1Q7Z3B3 1105 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 TTC7BQ86TV6 843 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 EID2Q8N6I1 236 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 KDF1Q8NAX2 398 aaPredicted RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 FAM174AQ8TBP5 190 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 BMFQ96LC9 184 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 CPEB1Q9BZB8 566 aaKnown RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 LHX3Q9UBR4 397 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 UBA2Q9UBT2 640 aaPredicted RBP16.3■□□□□ 0.2
USE1-201ENST00000263897 FTSJ1Q9UET6 329 aa16.3■□□□□ 0.2
USE1-201ENST00000263897 PLXNB3Q9ULL4 1909 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 TMEM8BA6NDV4 472 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 IGLON5A6NGN9 336 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 ARHGAP42A6NI28 874 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 NEMP1O14524 444 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 AREL1O15033 823 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 LDOC1O95751 146 aaPredicted RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 GYPCP04921 128 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 PAPOLAP51003 745 aaKnown RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 SGCGQ13326 291 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 PIGHQ14442 188 aaPredicted RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 BOLA3Q53S33 107 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 AFMIDQ63HM1 303 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 CCNI2Q6ZMN8 369 aaPredicted RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 GCNT7Q6ZNI0 430 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 ABI3BPQ7Z7G0 1075 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 DCP2Q8IU60 420 aaKnown RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 ASB12Q8WXK4 309 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 ARHGEF26Q96DR7 871 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 LENG8Q96PV6 779 aaPredicted RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 XPO4Q9C0E2 1151 aaKnown RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 THAP2Q9H0W7 228 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 PDFQ9HBH1 243 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 KLHL11Q9NVR0 708 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 CWC15Q9P013 229 aaKnown RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 DKK3Q9UBP4 350 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.29■□□□□ 0.2
USE1-201ENST00000263897 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
USE1-201ENST00000263897 COL5A1P20908 1838 aaPredicted RBP16.29■□□□□ 0.2
USE1-201ENST00000263897 POM121BA6NF01 834 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 RAD51BO15315 384 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 INSIG1O15503 277 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 SPINT1O43278 529 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 CYP1A2P05177 515 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 TIMP2P16035 220 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 IL1R2P27930 398 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 CASP14P31944 242 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 ALKBH5Q6P6C2 394 aaKnown RBP16.28■□□□□ 0.2
USE1-201ENST00000263897 Q6ZSR6 202 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 TMPRSS7Q7RTY8 843 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 ARHGAP12Q8IWW6 846 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 HCAR2Q8TDS4 363 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 CNDP2Q96KP4 475 aaKnown RBP16.28■□□□□ 0.2
USE1-201ENST00000263897 KLF6Q99612 283 aaPredicted RBP16.28■□□□□ 0.2
USE1-201ENST00000263897 CALN1Q9BXU9 219 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 GGT7Q9UJ14 662 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 ITM2BQ9Y287 266 aa16.28■□□□□ 0.2
USE1-201ENST00000263897 A6NNZ2 444 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 ENC1O14682 589 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 KRT37O76014 449 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 TPM3P06753 285 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 TCF4P15884 667 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 HNRNPH3P31942 346 aaKnown RBP16.27■□□□□ 0.2
USE1-201ENST00000263897 DPYSQ14117 519 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 GRM3Q14832 879 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 DPYSL2Q16555 572 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 SLC25A45Q8N413 288 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms