RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SLC7A2P52569 658 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 CSE1LP55060 971 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 ADARP55265 1226 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SH3BGRP55822 239 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 CLEC20AQ6ZU45 233 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF410Q86VK4 478 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 DNAJB3Q8WWF6 145 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 RPL10LQ96L21 214 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 NFKBIZQ9BYH8 718 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 PIF1Q9H611 641 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 TNFRSF12AQ9NP84 129 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 TBC1D30Q9Y2I9 924 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 PSMD12O00232 456 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 SDHDO14521 159 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 SUPT3HO75486 399 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 HPCAP84074 193 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 FAM83EQ2M2I3 478 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 REP15Q6BDI9 236 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 TWF2Q6IBS0 349 aaKnown RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 MFSD6LQ8IWD5 586 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 AHI1Q8N157 1196 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 LRRC52Q8N7C0 313 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 ARHGEF38Q9NXL2 777 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 DSEQ9UL01 958 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 PHF24Q9UPV7 400 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 RNF103-CHMP3A0A140T963 221 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 PRORSD1PA6NEY8 169 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF487B1APH4 448 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 NR5A2O00482 541 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 MT-ND1P03886 318 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 LRPAP1P30533 357 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 NR1H2P55055 460 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 CACNB2Q08289 660 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 TMEM259Q4ZIN3 620 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF789Q5FWF6 425 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 STYXQ8WUJ0 223 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 MRPL46Q9H2W6 279 aaKnown RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-201ENST00000263856 VTI1BQ9UEU0 232 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 PTGDR2Q9Y5Y4 395 aa12.52□□□□□ -0.41
CHMP3-201ENST00000263856 TTC24A2A3L6 582 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CCDC166P0CW27 439 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CYP2C9P11712 490 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 MAGEA12P43365 314 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 NPY2RP49146 381 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 KDM1BQ8NB78 822 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 PPHLN1Q8NEY8 458 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 HASPINQ8TF76 798 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CYGBQ8WWM9 190 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 RMND5BQ96G75 393 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 HSFX1Q9UBD0 423 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 TMCO1Q9UM00 188 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF711Q9Y462 761 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 PRSS51A0A1B0GVH4 220 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 MYBPHLA2RUH7 354 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 SRP72O76094 671 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CDK4P11802 303 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 STT3AP46977 705 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 LILRA4P59901 499 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 TRIM25Q14258 630 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CAPRIN1Q14444 709 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 HABP4Q5JVS0 413 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 TSTD2Q5T7W7 516 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 DDIASQ8IXT1 998 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CNTD1Q8N815 330 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 TMEM102Q8N9M5 508 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 DLG3Q92796 817 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 TBL1YQ9BQ87 522 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 RSL24D1Q9UHA3 163 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 RNF11Q9Y3C5 154 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 TRPC5OSA6NMA1 111 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
CHMP3-201ENST00000263856 MAXP61244 160 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 IKBKEQ14164 716 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 MYBPC3Q14896 1274 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 SV2CQ496J9 727 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 LRCH3Q96II8 777 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CNDP1Q96KN2 507 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 CAMKK2Q96RR4 588 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 C16orf70Q9BSU1 422 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 HAUS8Q9BT25 410 aa12.51□□□□□ -0.41
CHMP3-201ENST00000263856 DNAI2Q9GZS0 605 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms