RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 PIWIL2Q8TC59 973 aaKnown RBP19.32■□□□□ 0.68
UPF1-201ENST00000262803 TRPC4APQ8TEL6 797 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 ELMO1Q92556 727 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 UNC5CO95185 931 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 LAG3P18627 525 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 GRM5P41594 1212 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 BMT2Q1RMZ1 405 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 Q96MT0 163 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 REEP1Q9H902 201 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 RNPEPL1Q9HAU8 725 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 GPR1P46091 355 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 CHADLQ6NUI6 762 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 LPCAT2Q7L5N7 544 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 FAM20CQ8IXL6 584 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 RGL4Q8IZJ4 473 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 RERGQ96A58 199 aaPredicted RBP19.32■□□□□ 0.68
UPF1-201ENST00000262803 GGA2Q9UJY4 613 aa19.32■□□□□ 0.68
UPF1-201ENST00000262803 MRTO4Q9UKD2 239 aaKnown RBP19.32■□□□□ 0.68
UPF1-201ENST00000262803 ZMYND8Q9ULU4 1186 aaPredicted RBP19.32■□□□□ 0.68
UPF1-201ENST00000262803 TGFB1I1O43294 461 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 HDCP19113 662 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 ABCG1P45844 678 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 ITFG1Q8TB96 612 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 PSMG1O95456 288 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 ATP4AP20648 1035 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 SCNN1GP51170 649 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 DOK6Q6PKX4 331 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 PEG10Q86TG7 708 aaKnown RBP19.31■□□□□ 0.68
UPF1-201ENST00000262803 ZNF184Q99676 751 aaPredicted RBP19.31■□□□□ 0.68
UPF1-201ENST00000262803 FAM237BA0A1B0GVD1 139 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 PEX1O43933 1283 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 PSMB4P28070 264 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 SQLEQ14534 574 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 PLEKHA7Q6IQ23 1121 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 PHF13Q86YI8 300 aaPredicted RBP19.31■□□□□ 0.68
UPF1-201ENST00000262803 OR8D1Q8WZ84 308 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 LIMD1Q9UGP4 676 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 MRPS33Q9Y291 106 aaKnown RBP19.31■□□□□ 0.68
UPF1-201ENST00000262803 FSCN2O14926 492 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 CLOCKO15516 846 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 TAB1Q15750 504 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 IRGCQ6NXR0 463 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 IL27RAQ6UWB1 636 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 FAM220AQ7Z4H9 259 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 CERS5Q8N5B7 392 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 TNFRSF25Q93038 417 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 SOHLH2Q9NX45 425 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.31■□□□□ 0.68
UPF1-201ENST00000262803 TSC22D4Q9Y3Q8 395 aa19.31■□□□□ 0.68
UPF1-201ENST00000262803 MRPL42Q9Y6G3 142 aaKnown RBP19.31■□□□□ 0.68
UPF1-201ENST00000262803 DISP2A7MBM2 1401 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 UMPSP11172 480 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ATP5F1P24539 256 aaPredicted RBP19.3■□□□□ 0.68
UPF1-201ENST00000262803 NOMO3P69849 1222 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ECM1Q16610 540 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ZACNQ401N2 412 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 RNF43Q68DV7 783 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 MZT2AQ6P582 158 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 KRT74Q7RTS7 529 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 C4orf32Q8N8J7 132 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 SENP6Q9GZR1 1112 aaPredicted RBP19.3■□□□□ 0.68
UPF1-201ENST00000262803 TBC1D30Q9Y2I9 924 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 RIMS1Q86UR5 1692 aaKnown RBP19.3■□□□□ 0.68
UPF1-201ENST00000262803 H0YC42 278 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 TNFAIP8O95379 198 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ITGAVP06756 1048 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 DRD4P21917 467 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 TCEAL5Q5H9L2 206 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 FGD3Q5JSP0 725 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 DSELQ8IZU8 1212 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 OR52K1Q8NGK4 314 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 CLEC4MQ9H2X3 399 aaPredicted RBP19.3■□□□□ 0.68
UPF1-201ENST00000262803 TBC1D14Q9P2M4 693 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 INVSQ9Y283 1065 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 AVILO75366 819 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ABCB1P08183 1280 aaPredicted RBP19.3■□□□□ 0.68
UPF1-201ENST00000262803 PDK4Q16654 411 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 DEFB115Q30KQ5 88 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 EXOC3L1Q86VI1 746 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 COMMD2Q86X83 199 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 TMEM139Q8IV31 216 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 AGAP11Q8TF27 550 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ALG3Q92685 438 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 RORBQ92753 470 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 RNF157Q96PX1 679 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 SNRNP25Q9BV90 132 aaKnown RBP19.3■□□□□ 0.68
UPF1-201ENST00000262803 ASB8Q9H765 288 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 TTKP33981 857 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 HNMTP50135 292 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 CDC42P60953 191 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 CRADDP78560 199 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 FAM183BPQ6ZVS7 135 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 BBS12Q6ZW61 710 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 CD101Q93033 1021 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 PWWP2AQ96N64 755 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 ROGDIQ9GZN7 287 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 IGFLR1Q9H665 355 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 POLR1BQ9H9Y6 1135 aa19.3■□□□□ 0.68
UPF1-201ENST00000262803 GSTK1Q9Y2Q3 226 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms