RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PIP4K2CQ8TBX8 421 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 GRIN3AQ8TCU5 1115 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 PRCCQ92733 491 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 MAGOHBQ96A72 148 aaKnown RBP16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 RTP4Q96DX8 246 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 TUBGCP5Q96RT8 1024 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 SCUBE2Q9NQ36 999 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 KLHL8Q9P2G9 620 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 FBXO4Q9UKT5 387 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 WDFY4Q6ZS81 3184 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 C1QTNF3-AMACRE9PGA6 284 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 STK10O94804 968 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 SLC8A1P32418 973 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 PXNP49023 591 aaPredicted RBP16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 DSC2Q02487 901 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 CSTF1Q05048 431 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 ANKRD20A2Q5SQ80 823 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 ANKRD20A1Q5TYW2 823 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 ANKRD20A3Q5VUR7 823 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 FAM46CQ5VWP2 391 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 CACUL1Q86Y37 369 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 PGBD3Q8N328 593 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 SPATA13Q96N96 652 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 OSBPL1AQ9BXW6 950 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 SLC25A51Q9H1U9 297 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 GLOD4Q9HC38 313 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 BCCIPQ9P287 314 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 CDC23Q9UJX2 597 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 SCML1Q9UN30 329 aa16.82■□□□□ 0.28
CHCHD3-201ENST00000262570 CCDC163A0A0D9SF12 145 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 PHF2O75151 1096 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 GCATO75600 419 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ADH1BP00325 375 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 DNTTP04053 509 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 UGT2B4P06133 528 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 C5AR1P21730 350 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 COILP38432 576 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 PSMD8P48556 350 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 METAP1P53582 386 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 IHHQ14623 411 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 TTC27Q6P3X3 843 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 KIAA1324Q6UXG2 1013 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 GDPD4Q6W3E5 623 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 CAMK1DQ8IU85 385 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ATL2Q8NHH9 583 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 CCDC110Q8TBZ0 833 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 IMP4Q96G21 291 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF641Q96N77 438 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ATP13A3Q9H7F0 1226 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF318Q5VUA4 2279 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 KMT2EQ8IZD2 1858 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 KPNA3O00505 521 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 TRAFD1O14545 582 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 MID1O15344 667 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 GALR2O43603 387 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 OPHN1O60890 802 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 PIGNO95427 931 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 MMP2P08253 660 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ACADMP11310 421 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 NFKB1P19838 968 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 FNTAP49354 379 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 BCL2L1Q07817 233 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 DMWDQ09019 674 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ANGPT1Q15389 498 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 P3H1Q32P28 736 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 CCDC137Q6PK04 289 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 PRPF39Q86UA1 669 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 FCRL5Q96RD9 977 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 TPSD1Q9BZJ3 242 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 SUV39H2Q9H5I1 410 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 PCDHGC4Q9Y5F7 938 aa16.81■□□□□ 0.28
CHCHD3-201ENST00000262570 AXIN1O15169 862 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 IFNB1P01574 187 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 SERPINF2P08697 491 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 SERPINA4P29622 427 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 DRD3P35462 400 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 CD86P42081 329 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 SKOR1P84550 965 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 LMNB2Q03252 620 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 POM121L1PQ3SYA9 428 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 TTC31Q49AM3 519 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF805Q5CZA5 627 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 AADATQ8N5Z0 425 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 HCAR2Q8TDS4 363 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 NELL1Q92832 810 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 ARRDC3Q96B67 414 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 TADA1Q96BN2 335 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 ECHDC3Q96DC8 303 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 PPP1R16AQ96I34 528 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 KLHL32Q96NJ5 620 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 GBA3Q9H227 469 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 USP36Q9P275 1121 aaKnown RBP16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 RSPH14Q9UHP6 348 aa16.8■□□□□ 0.28
CHCHD3-201ENST00000262570 CCDC188H7C350 402 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms