RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 COL5A1P20908 1838 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 SPTY2D1-AS1A0A0U1RR47 76 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 C10orf142B7Z368 130 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 KDELR3O43731 214 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 MMP20O60882 483 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 CSO75390 466 aaKnown RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 TMCC1O94876 653 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 GP1BAP07359 652 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 CTSEP14091 401 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 RFC1P35251 1148 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 COPB1P53618 953 aaKnown RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 PCBP4P57723 403 aaKnown RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 GABREP78334 506 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 NRG1Q02297 640 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 NR0B2Q15466 257 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 LRRC73Q5JTD7 316 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 ESRP1Q6NXG1 681 aaKnown RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 ERAP2Q6P179 960 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 EFL1Q7Z2Z2 1120 aaKnown RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 SLC22A18ASQ8N1D0 253 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 CACTIN-AS1Q8N1I8 211 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 CCDC185Q8N715 623 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 DCBLD1Q8N8Z6 715 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 ZNF248Q8NDW4 579 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 DENND6BQ8NEG7 585 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 ZNF548Q8NEK5 533 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 RFFLQ8WZ73 363 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 BMFQ96LC9 184 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 WRAP53Q9BUR4 548 aaKnown RBP12.42□□□□□ -0.42
TRAF4-202ENST00000262396 NDFIP2Q9NV92 336 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 DMXL2Q8TDJ6 3036 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 ATRXP46100 2492 aa12.42□□□□□ -0.42
TRAF4-202ENST00000262396 SPEGQ15772 3267 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 CXorf51AA0A1B0GTR3 108 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 FAM72CH0Y354 149 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 RNF103O00237 685 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 RIOK3O14730 519 aaKnown RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 MUSKO15146 869 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 RAD51BO15315 384 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 TLX3O43711 291 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 LZTS3O60299 673 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 ZNF821O75541 412 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 APC2O95996 2303 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 MPOP05164 745 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 NME1P15531 152 aaKnown RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 CHRNB2P17787 502 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 TNFAIP3P21580 790 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 HTR1BP28222 390 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 ABL2P42684 1182 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 BLKP51451 505 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 ADKP55263 362 aaKnown RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 HDAC4P56524 1084 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 TPI1P60174 286 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 CXADRP78310 365 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 MYL5Q02045 173 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 PPARDQ03181 441 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 ELP6Q0PNE2 266 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 FZD2Q14332 565 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 CLEC16AQ2KHT3 1053 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 TBC1D25Q3MII6 688 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 RAB6CQ53S08 254 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 PRRT3Q5FWE3 981 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 FAM72AQ5TYM5 149 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 FAM72DQ6L9T8 149 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 DPY19L2P1Q6NXN4 242 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 WDR59Q6PJI9 974 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 FAM72BQ86X60 149 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 RTL3Q8N8U3 475 aaKnown RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 ATL2Q8NHH9 583 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 TPCN2Q8NHX9 752 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 NTAN1Q96AB6 310 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 CRELD1Q96HD1 420 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 MCEEQ96PE7 176 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 AGPAT1Q99943 283 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 TTYH3Q9C0H2 523 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 RAB6CQ9H0N0 254 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 THSD1Q9NS62 852 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 NYNRINQ9P2P1 1898 aaKnown RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 GULP1Q9UBP9 304 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 UBA2Q9UBT2 640 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 PCDHB1Q9Y5F3 818 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 CSNK1G3Q9Y6M4 447 aa12.41□□□□□ -0.42
TRAF4-202ENST00000262396 DSPP15924 2871 aaKnown RBP12.41□□□□□ -0.42
TRAF4-202ENST00000262396 SIGLEC16A6NMB1 481 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 RASA4BC9J798 803 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 FGF10O15520 208 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-202ENST00000262396 CCP110O43303 1012 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 RASA4O43374 803 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 FERP16591 822 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 JAM2P57087 298 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 YBEYP58557 167 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-202ENST00000262396 YPEL5P62699 121 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
TRAF4-202ENST00000262396 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 C1orf61Q13536 156 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms