RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 GRHL1Q9NZI5 618 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 SORCS3Q9UPU3 1222 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 TP73O15350 636 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 INSIG1O15503 277 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 ATP5BP06576 529 aaKnown RBP27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 SCNN1BP51168 640 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 PFKPQ01813 784 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 MTM1Q13496 603 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 Q6ZVU0 165 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 ARRDC2Q8TBH0 407 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 CPT1BQ92523 772 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 MLPHQ9BV36 600 aaPredicted RBP27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 RAB17Q9H0T7 212 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 BHMG1C9JSJ3 638 aaPredicted RBP27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 ANKRD65E5RJM6 399 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 CD86P42081 329 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 WASP42768 502 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 CARSP49589 748 aaKnown RBP27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 ZNF234Q14588 700 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 RFTN1Q14699 578 aaPredicted RBP27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 C22orf39Q6P5X5 142 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 KDELC2Q7Z4H8 507 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 PWWP2AQ96N64 755 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 MGME1Q9BQP7 344 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 NEUROG2Q9H2A3 272 aa27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 C8orf33Q9H7E9 229 aaPredicted RBP27.85■■■□□ 2.05
SMARCD3-201ENST00000262188 MMP2P08253 660 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 FNDC3BQ53EP0 1204 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 PRPF39Q86UA1 669 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 SNF8Q96H20 258 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 POLR1EQ9GZS1 481 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 NOD2Q9HC29 1040 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 CACNA2D2Q9NY47 1150 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 GOLGA8MH3BSY2 632 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 RNF40O75150 1001 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 ITGA8P53708 1063 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 PARP6Q2NL67 630 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 PDCD7Q8N8D1 485 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 MUTYHQ9UIF7 546 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 NDRG2Q9UN36 371 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 PLA2G4CQ9UP65 541 aa27.84■■■□□ 2.05
SMARCD3-201ENST00000262188 DNALI1O14645 258 aaPredicted RBP27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 APRTP07741 180 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 TIE1P35590 1138 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 GEMIN4P57678 1058 aaKnown RBP27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 TMEM196Q5HYL7 178 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 ITPRIPL1Q6GPH6 555 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 WDR93Q6P2C0 686 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 FRS2Q8WU20 508 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 GDF3Q9NR23 364 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 BATF3Q9NR55 127 aa27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 PIH1D1Q9NWS0 290 aaKnown RBP27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 EVLQ9UI08 416 aaPredicted RBP27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 MUC22E2RYF6 1773 aaPredicted RBP27.83■■■□□ 2.05
SMARCD3-201ENST00000262188 USP12O75317 370 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 PMPCBO75439 489 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 TMEM63AO94886 807 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 MYBL2P10244 700 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 GRIA1P42261 906 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 IL12RB1P42701 662 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 EIF4HQ15056 248 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 PCSK7Q16549 785 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 C2orf27AQ580R0 203 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 RNASEH2BQ5TBB1 312 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 BBS5Q8N3I7 341 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 RYBPQ8N488 228 aaPredicted RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 ZNF483Q8TF39 744 aaPredicted RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 SEC14L1Q92503 715 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 FAM3CQ92520 227 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 IMP4Q96G21 291 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 APOL2Q9BQE5 337 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 TPX2Q9ULW0 747 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 ASLP04424 464 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 CR2P20023 1033 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 PAX7P23759 505 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 PLTPP55058 493 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 VSNL1P62760 191 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 MLF2Q15773 248 aaPredicted RBP27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 ZDHHC24Q6UX98 284 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 CHST14Q8NCH0 376 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 LRRC45Q96CN5 670 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 FCRL5Q96RD9 977 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 SLC25A51Q9H1U9 297 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 MUC3AQ02505 3323 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 A0A0C4DFX4 3053 aa27.82■■■□□ 2.04
SMARCD3-201ENST00000262188 KRBA1A5PL33 1030 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 ATP9BO43861 1147 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 PRKCHP24723 683 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 KCNJ11Q14654 390 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 RBBP5Q15291 538 aaKnown RBP27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 MICALCLQ6ZW33 695 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 CCHCR1Q8TD31 782 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 SCUBE2Q9NQ36 999 aa27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 FARP1Q9Y4F1 1045 aaPredicted RBP27.81■■■□□ 2.04
SMARCD3-201ENST00000262188 SRPRAP08240 638 aaKnown RBP27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 KIR2DL1P43626 348 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 ST8SIA6P61647 398 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 SKOR1P84550 965 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 SEMA5AQ13591 1074 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 DPY19L3Q6ZPD9 716 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms