RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SNAP47Q5SQN1 464 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 PJA1Q8NG27 643 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 SPATC1LQ9H0A9 340 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 COL3A1P02461 1466 aaPredicted RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 RPL9P32969 192 aaKnown RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 PTPN5P54829 565 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 MTA1Q13330 715 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 RFX4Q33E94 735 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 XKR6Q5GH73 641 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 FNBP1LQ5T0N5 605 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 CCSAPQ6IQ19 270 aaPredicted RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 ZNF549Q6P9A3 640 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 ARHGAP22Q7Z5H3 698 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 PHF10Q8WUB8 498 aaKnown RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 PPP1R13LQ8WUF5 828 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 ULBP1Q9BZM6 244 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 LTA4HP09960 611 aaKnown RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 ADRA1DP25100 572 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 DPYSL3Q14195 570 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 ZFP28Q8NHY6 868 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 SYTL5Q8TDW5 730 aaPredicted RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 NELL1Q92832 810 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 ETNK2Q9NVF9 386 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 MARCH2Q9P0N8 246 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 LRCH1Q9Y2L9 728 aa14.41□□□□□ -0.1
CUX2-201ENST00000261726 TNPO3Q9Y5L0 923 aaKnown RBP14.41□□□□□ -0.1
CUX2-201ENST00000261726 OR10H3O60404 316 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TMCC2O75069 709 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 LRATO95237 230 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 RPLP2P05387 115 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 RPL38P63173 70 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 STXBP5Q5T5C0 1151 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 APTXQ7Z2E3 356 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 TMC3Q7Z5M5 1100 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 CLCC1Q96S66 551 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 SUCOQ9UBS9 1254 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 CLEC4AQ9UMR7 237 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 SEC24AO95486 1093 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 BMP7P18075 431 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 UGT2B15P54855 530 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TOP3AQ13472 1001 aaPredicted RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 ZNF846Q147U1 533 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 NR1D2Q14995 579 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 SUZ12Q15022 739 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 PTGR2Q8N8N7 351 aaPredicted RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 ZNF248Q8NDW4 579 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TM6SF2Q9BZW4 377 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 RPS6KA6Q9UK32 745 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 VPS4AQ9UN37 437 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 CDK7P50613 346 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 NEK5Q6P3R8 708 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 SPESP1Q6UW49 350 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 ATXN2LQ8WWM7 1075 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 EVA1BQ9NVM1 165 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 ADCY6O43306 1168 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 ERAL1O75616 437 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 PTPN1P18031 435 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 TGFBR2P37173 567 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TROAPQ12815 778 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TTC23Q5W5X9 447 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 MLPHQ9BV36 600 aaPredicted RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 FNDC11Q9BVV2 318 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TRMT13Q9NUP7 481 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 GPN3Q9UHW5 284 aaPredicted RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 PRKAB1Q9Y478 270 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 VIL1P09327 827 aaKnown RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 MSLNQ13421 630 aaPredicted RBP14.4□□□□□ -0.1
CUX2-201ENST00000261726 ITPK1Q13572 414 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 POMZP3Q6PJE2 187 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TTC7BQ86TV6 843 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 ZBTB46Q86UZ6 589 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 DENND1CQ8IV53 801 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 REPS2Q8NFH8 660 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 KBTBD7Q8WVZ9 684 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 LENG9Q96B70 501 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 Q96MT0 163 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 TBCBQ99426 244 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 CDADC1Q9BWV3 514 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 ERGIC3Q9Y282 383 aa14.4□□□□□ -0.1
CUX2-201ENST00000261726 ISM1B1AKI9 464 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 TBL1XO60907 577 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 TOP3BO95985 862 aaKnown RBP14.39□□□□□ -0.11
CUX2-201ENST00000261726 CYP4B1P13584 511 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
CUX2-201ENST00000261726 CXXC5Q7LFL8 322 aaKnown RBP14.39□□□□□ -0.11
CUX2-201ENST00000261726 MYDGFQ969H8 173 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 ZBTB45Q96K62 511 aaPredicted RBP14.39□□□□□ -0.11
CUX2-201ENST00000261726 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 POLLQ9UGP5 575 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 SLC25A3Q00325 362 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 PPP1R26Q5T8A7 1209 aaPredicted RBP14.39□□□□□ -0.11
CUX2-201ENST00000261726 ENGASEQ8NFI3 743 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 STAG3L4Q8TBR4 150 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 PSMG1O95456 288 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 CALCAP01258 141 aa14.39□□□□□ -0.11
CUX2-201ENST00000261726 H2AFXP16104 143 aaPredicted RBP14.39□□□□□ -0.11
CUX2-201ENST00000261726 POLNQ7Z5Q5 900 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms