RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GEN1Q17RS7 908 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 AGKQ53H12 422 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 OGFRL1Q5TC84 451 aaPredicted RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 IL23RQ5VWK5 629 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZC3HC1Q86WB0 502 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZNF354CQ86Y25 554 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 C6orf203Q9P0P8 240 aaPredicted RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 COPG1Q9Y678 874 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 TMEM114B3SHH9 223 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 C9IYK1 514 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 MOCS2O96007 188 aaPredicted RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 CD4P01730 458 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 STMN1P16949 149 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 RPL5P46777 297 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 GJA9P57773 515 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 CDH17Q12864 832 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 DPYSQ14117 519 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ADGRE1Q14246 886 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZBTB6Q15916 424 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZNF423Q2M1K9 1284 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 NOMO2Q5JPE7 1267 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 TRIML2Q8N7C3 387 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 DGCR14Q96DF8 476 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 KLHL32Q96NJ5 620 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 SLC39A3Q9BRY0 314 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 FICDQ9BVA6 458 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 CASS4Q9NQ75 786 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 SIP14410 1827 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 MYBPHLA2RUH7 354 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 MEIS3P2A8K0S8 358 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 C9JVG2 144 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 HNRNPRO43390 633 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 TPST1O60507 370 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 DAB1O75553 588 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 RNASEH2AO75792 299 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 LRIG2O94898 1065 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 F2P00734 622 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 HOXD10P28358 340 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 GABRB3P28472 473 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ITKQ08881 620 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 LSAMPQ13449 338 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 PAFAH1B3Q15102 231 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ARL13BQ3SXY8 428 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZNF470Q6ECI4 717 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ITPRIPL1Q6GPH6 555 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 ZYG11AQ6WRX3 759 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 BTBD9Q96Q07 612 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 IL22Q9GZX6 179 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 POMKQ9H5K3 350 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 FAM95CA0A1B0GW59 222 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 CCL22O00626 93 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 AURKAO14965 403 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 CABYRO75952 493 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 SLC35E2BP0CK96 405 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 CHRNA4P43681 627 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 SLC12A1Q13621 1099 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 LRRC8EQ6NSJ5 796 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 DNAI2Q9GZS0 605 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 RCOR3Q9P2K3 495 aaPredicted RBP14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 EPS15L1Q9UBC2 864 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 BCAP29Q9UHQ4 241 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 MID2Q9UJV3 735 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 FYNP06241 537 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 TAS2R39P59534 338 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 PPP1R3AQ16821 1122 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 PIGGQ5H8A4 983 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 NAPEPLDQ6IQ20 393 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 PAQR9Q6ZVX9 377 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 LDB1Q86U70 411 aaPredicted RBP14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 MYO1HQ8N1T3 1032 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 DIS3LQ8TF46 1054 aaKnown RBP14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 COLEC11Q9BWP8 271 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 GBA3Q9H227 469 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 RHOJQ9H4E5 214 aa14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 PRPF19Q9UMS4 504 aaKnown RBP14.63□□□□□ -0.07
SFSWAP-201ENST00000261674 UNC80Q8N2C7 3258 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 PIRO00625 290 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 SBK3P0C264 359 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 FAM58BPP0C7Q3 252 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 SV2CQ496J9 727 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 KRT80Q6KB66 452 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 KLHDC10Q6PID8 442 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 TRIM67Q6ZTA4 783 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 CENPLQ8N0S6 344 aaPredicted RBP14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 LINC01465Q8N7H1 131 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 CNTD1Q8N815 330 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 ARRDC4Q8NCT1 418 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 OR9I1Q8NGQ6 314 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 ZFP28Q8NHY6 868 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 LRTOMTQ8WZ04 291 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 LPPQ93052 612 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 FSD1LQ9BXM9 530 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 LIN28AQ9H9Z2 209 aaKnown RBP14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 H3BSA7 217 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 PYGLP06737 847 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 PRDX6P30041 224 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 NPY2RP49146 381 aa14.62□□□□□ -0.07
SFSWAP-201ENST00000261674 AFF1P51825 1210 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms