RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 SEL1L3Q68CR1 1132 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 ANKRD26P1Q6NSI1 321 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 GPRASP2Q96D09 838 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 TCF12Q99081 682 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 GBA2Q9HCG7 927 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-201ENST00000261556 FAM49BQ9NUQ9 324 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-201ENST00000261556 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.315e-6■■■■■ 189.5
TMEM260-201ENST00000261556 DPYSL4O14531 572 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 HAT1O14929 419 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 TADA2AO75478 443 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 CALCAP01258 141 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 TAL1P17542 331 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-201ENST00000261556 MMP8P22894 467 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 SESN2P58004 480 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-201ENST00000261556 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 VANGL1Q8TAA9 524 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-201ENST00000261556 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 CD274Q9NZQ7 290 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 STK25O00506 426 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 MED24O75448 989 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
TMEM260-201ENST00000261556 ZNF806P0C7X5 589 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 PIK3R1P27986 724 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 MGAT5BQ3V5L5 792 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 ST8SIA2Q92186 375 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 EXT2Q93063 718 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 ALPK1Q96QP1 1244 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 C9orf16Q9BUW7 83 aa13.11□□□□□ -0.31
TMEM260-201ENST00000261556 SMIM22K7EJ46 135 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 GRAP2O75791 330 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PRKCAP17252 672 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SHMT1P34896 483 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CLCN3P51790 818 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 RPL26P61254 145 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 OLR1P78380 273 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 BNIP2Q12982 314 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 IKBKEQ14164 716 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 TBRG1Q3YBR2 411 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 C5orf22Q49AR2 442 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 KIAA0408Q6ZU52 694 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 DENND1AQ8TEH3 1009 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 NTN4Q9HB63 628 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ZNHIT2Q9UHR6 403 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 MYOM1P52179 1685 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 MYH7P12883 1935 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CDK2AP1O14519 115 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PLD2O14939 933 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CST8O60676 142 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ALX3O95076 343 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PSME3P61289 254 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 RHAGQ02094 409 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SELENBP1Q13228 472 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 EFR3AQ14156 821 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 KYAT1Q16773 422 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CYP51A1Q16850 503 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ATP13A4Q4VNC1 1196 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PPP4R4Q6NUP7 873 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PID1Q7Z2X4 250 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 BANPQ8N9N5 519 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 LPGAT1Q92604 370 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.314e-10■■■■■ 29.8
TMEM260-201ENST00000261556 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ILKAPQ9H0C8 392 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ARMC1Q9NVT9 282 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SESN1Q9Y6P5 492 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CNTNAP2Q9UHC6 1331 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PLSCR1O15162 318 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 STX7O15400 261 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 AMHP03971 560 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 YES1P07947 543 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ABCE1P61221 599 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 DPYSQ14117 519 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 BCL2A1Q16548 175 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CCBE1Q6UXH8 406 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 TRIM48Q8IWZ4 208 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 BFARQ9NZS9 450 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 SERPINE1P05121 402 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms