RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PRRG3Q9BZD7 231 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 CCRL2O00421 344 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 HAT1O14929 419 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 MAGEC1O60732 1142 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 PRLP01236 227 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF286BP0CG31 522 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 MACC1Q6ZN28 852 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 ILDR2Q71H61 639 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 EIF3MQ7L2H7 374 aaKnown RBP9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 RAB42Q8N4Z0 105 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 TMEM161BQ8NDZ6 487 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 TLCD1Q96CP7 247 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 TBCBQ99426 244 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 TPK1Q9H3S4 243 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 SYNPO2Q9UMS6 1093 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 MYO5BQ9ULV0 1848 aa9.84□□□□□ -0.83
CTDSPL2-201ENST00000260327 H0Y858 1186 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 TRUB2O95900 331 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 F9P00740 461 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 AZGP1P25311 298 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 GABRB2P47870 512 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 RHBDL3P58872 404 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 NOMO3P69849 1222 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 TIGD7Q6NT04 549 aaPredicted RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 CAB39LQ9H9S4 337 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 EBF2Q9HAK2 575 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 GSTK1Q9Y2Q3 226 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 FARP1Q9Y4F1 1045 aaPredicted RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 NOTOA8MTQ0 251 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 ADAMTS3O15072 1205 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 MPSTP25325 297 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 PBLDP30039 288 aaPredicted RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 CCR1P32246 355 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 PHC1P78364 1004 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 VEPH1Q14D04 833 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 FBXO47Q5MNV8 452 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 CMC1Q7Z7K0 106 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 DDX53Q86TM3 631 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 FAM156AQ8NDB6 213 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 OR56A4Q8NGH8 313 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 CLPBQ9H078 707 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 WDR37Q9Y2I8 494 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 PCDHAC2Q9Y5I4 1007 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 TMEM114B3SHH9 223 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 TNFSF9P41273 254 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 GSTM5P46439 218 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 ALDH9A1P49189 494 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 NADK2Q4G0N4 442 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 MFSD5Q6N075 450 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 OR5B17Q8NGF7 314 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 SLC2A14Q8TDB8 520 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 MYDGFQ969H8 173 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 OSMRQ99650 979 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 NEURL4Q96JN8 1562 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 BPGMP07738 259 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 MYL4P12829 197 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 WARSP23381 471 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 KCTD8Q6ZWB6 473 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 KRT77Q7Z794 578 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 RAB43Q86YS6 212 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 HELQQ8TDG4 1101 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 TMEM138Q9NPI0 162 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 RASSF1Q9NS23 344 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 CMTM6Q9NX76 183 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 ITGA11Q9UKX5 1188 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 RAP2CQ9Y3L5 183 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 BIRC5O15392 142 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 SLC25A27O95847 323 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 ZNF12P17014 697 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 HARS2P49590 506 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 PTSQ03393 145 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 CA9Q16790 459 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 FAM183BPQ6ZVS7 135 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 C2orf69Q8N8R5 385 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 B3GALT6Q96L58 329 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 YIPF2Q9BWQ6 316 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 RNF181Q9P0P0 153 aa9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTDSPL2-201ENST00000260327 G3V2T6 193 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 TBX10O75333 385 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 PAICSP22234 425 aaKnown RBP9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 S100A3P33764 101 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 POLD2P49005 469 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 STARP49675 285 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 YWHAZP63104 245 aaKnown RBP9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 CYP4F8P98187 520 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 VPS72Q15906 364 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 MZT2AQ6P582 158 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 KRT74Q7RTS7 529 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 TAF8Q7Z7C8 310 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 CBR4Q8N4T8 237 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 ATP6V0D2Q8N8Y2 350 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 ABCG8Q9H221 673 aa9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 NFKBIL1Q9UBC1 381 aaPredicted RBP9.82□□□□□ -0.84
CTDSPL2-201ENST00000260327 RAPGEFL1Q9UHV5 662 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms