RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 CCDC166P0CW27 439 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 YAP1P46937 504 aaKnown RBP13.37□□□□□ -0.27
PGBD1-201ENST00000259883 YBX1P67809 324 aaKnown RBP13.37□□□□□ -0.27
PGBD1-201ENST00000259883 CCNA1P78396 465 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
PGBD1-201ENST00000259883 SLC12A1Q13621 1099 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 DPYSQ14117 519 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 FAM83EQ2M2I3 478 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 ZDHHC17Q8IUH5 632 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 PGAM4Q8N0Y7 254 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 CYGBQ8WWM9 190 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 TNIP3Q96KP6 325 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 C16orf70Q9BSU1 422 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 DUSP16Q9BY84 665 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 FAF1Q9UNN5 650 aaPredicted RBP13.37□□□□□ -0.27
PGBD1-201ENST00000259883 ANKRD33BA6NCL7 494 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 GRM2Q14416 872 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 ZBTB49Q6ZSB9 765 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 FAM35AQ86V20 835 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 DDIASQ8IXT1 998 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 MIPOL1Q8TD10 442 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 ZNF419Q96HQ0 510 aaPredicted RBP13.37□□□□□ -0.27
PGBD1-201ENST00000259883 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 NPY6RQ99463 290 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 OSBPL2Q9H1P3 480 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 IGSF9Q9P2J2 1179 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 HSFX1Q9UBD0 423 aa13.37□□□□□ -0.27
PGBD1-201ENST00000259883 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
PGBD1-201ENST00000259883 SDHDO14521 159 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 UBDO15205 165 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 TSPAN3O60637 253 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 ALOX15P16050 662 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 ACADSBP45954 432 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SLC26A2P50443 739 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 CDH17Q12864 832 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 PLA2G4EQ3MJ16 856 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 TSTD2Q5T7W7 516 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 PAQR9Q6ZVX9 377 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 CLVS1Q8IUQ0 354 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 MARVELD2Q8N4S9 558 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SCAMP5Q8TAC9 235 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 GBA3Q9H227 469 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 BTRCQ9Y297 605 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SSC5DA1L4H1 1573 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 RNF103-CHMP3A0A140T963 221 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 NCF1BA6NI72 391 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 NCF1CA8MVU1 366 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 TMEM114B3SHH9 223 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 PSMD12O00232 456 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 MRASO14807 208 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 TADA2AO75478 443 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SIX3O95343 332 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 HNRNPCP07910 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 NCF1P14598 390 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 BDNFP23560 247 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 LRPAP1P30533 357 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 RAB10P61026 200 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 CDK18Q07002 472 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 STXBP5Q5T5C0 1151 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SDHAF4Q5VUM1 108 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SPPL2CQ8IUH8 684 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 KDM1BQ8NB78 822 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 DRAXINQ8NBI3 349 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 CANT1Q8WVQ1 401 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 COLEC11Q9BWP8 271 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 SENP6Q9GZR1 1112 aaPredicted RBP13.36□□□□□ -0.27
PGBD1-201ENST00000259883 RHOJQ9H4E5 214 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 CASS4Q9NQ75 786 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 NCKIPSDQ9NZQ3 722 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 RNF11Q9Y3C5 154 aa13.36□□□□□ -0.27
PGBD1-201ENST00000259883 CASQ2O14958 399 aaPredicted RBP13.35□□□□□ -0.27
PGBD1-201ENST00000259883 CABYRO75952 493 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 VPS26BQ4G0F5 336 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 REP15Q6BDI9 236 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 CLEC14AQ86T13 490 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 HDAC11Q96DB2 347 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 CDCA5Q96FF9 252 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 PCED1BQ96HM7 432 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 B3GALT6Q96L58 329 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 KCNA7Q96RP8 456 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
PGBD1-201ENST00000259883 DAB1O75553 588 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
PGBD1-201ENST00000259883 NCK1P16333 377 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 NDST2P52849 883 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 BEX3Q00994 111 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 TMEM259Q4ZIN3 620 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 UNC93AQ86WB7 457 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 TMEM151AQ8N4L1 468 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
PGBD1-201ENST00000259883 ESAMQ96AP7 390 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms