RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 LRIG2O94898 1065 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 DGCR6Q14129 220 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CRY1Q16526 586 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CTXN3Q4LDR2 81 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SETMARQ53H47 684 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GALNT18Q6P9A2 607 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 METTL3Q86U44 580 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TMEM86AQ8N2M4 240 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 STAG3L4Q8TBR4 150 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TAS1R2Q8TE23 839 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TRMT13Q9NUP7 481 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 UXTQ9UBK9 157 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CLCN5P51795 746 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AP3S2P59780 193 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CYP2A13Q16696 494 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CLEC10AQ8IUN9 316 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AGAP11Q8TF27 550 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PIH1D2Q8WWB5 315 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 LENG9Q96B70 501 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TCF12Q99081 682 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 FKBP14Q9NWM8 211 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SLC9A8Q9Y2E8 581 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PPP2R3BQ9Y5P8 575 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ASCC3Q8N3C0 2202 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ERN1O75460 977 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ENO2P09104 434 aaPredicted RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 DRD4P21917 467 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 CYP2C18P33260 490 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 PKNOX1P55347 436 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 CREMQ03060 361 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ELAVL2Q12926 359 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 SKIV2LQ15477 1246 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TCEA2Q15560 299 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TNFAIP8L3Q5GJ75 292 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 NKAPQ8N5F7 415 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 GPRC5CQ9NQ84 441 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 KCNQ5Q9NR82 932 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ABCB10Q9NRK6 738 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 THG1LQ9NWX6 298 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 EURLQ9NYK6 297 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 LYVE1Q9Y5Y7 322 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 PHRF1Q9P1Y6 1649 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 LOC110117498-PIK3R3F6TDL0 507 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 SLC28A1O00337 649 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 FARP2O94887 1054 aaPredicted RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 NTSR2O95665 410 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ERBB2P04626 1255 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ACADMP11310 421 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 KDELR1P24390 212 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ILDR2Q71H61 639 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 FAM131BQ86XD5 332 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TRPV1Q8NER1 839 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 MNTQ99583 582 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TBC1D10AQ9BXI6 508 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TDRD1Q9BXT4 1180 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TRIT1Q9H3H1 467 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 DNAJC18Q9H819 358 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TMEM138Q9NPI0 162 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 CMTM6Q9NX76 183 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 RNF181Q9P0P0 153 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 COG5Q9UP83 839 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 OPLAHO14841 1288 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ZBTB14O43829 449 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ACO1P21399 889 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 EIF4BP23588 611 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 RAB10P61026 200 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 COPZ1P61923 177 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 SPIDRQ14159 915 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TBC1D21Q8IYX1 336 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 OFCC1Q8IZS5 231 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ZFP28Q8NHY6 868 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 EEF1AKMT1Q8WVE0 214 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TMEM169Q96HH4 297 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 APOL2Q9BQE5 337 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 A0A1W2PRG6 482 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 RBAK-RBAKDNI3L0D1 243 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 TRIM38O00635 465 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 LIASO43766 372 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 CES1P23141 567 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 PPIBP23284 216 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 FMO4P31512 558 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 FCGRTP55899 365 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 BACE1P56817 501 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 PSME3P61289 254 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 DDR1Q08345 913 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ANGEL2Q5VTE6 544 aaKnown RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 AAGABQ6PD74 315 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 MIB1Q86YT6 1006 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 SLC41A1Q8IVJ1 513 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 LINC00116Q8NCU8 138 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 MTG1Q9BT17 334 aaPredicted RBP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 POPDC2Q9HBU9 364 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 ARL15Q9NXU5 204 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 MKL2Q9ULH7 1088 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 PCDHB12Q9Y5F1 795 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 FAM205AQ6ZU69 1335 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 DDX3XO00571 662 aaKnown RBP eCLIP4.84□□□□□ -1.63
RC3H1-201ENST00000258349 URODP06132 367 aa4.84□□□□□ -1.63
RC3H1-201ENST00000258349 SSTR1P30872 391 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms