RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 PCDHA11Q9Y5I1 949 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 PCDHAC2Q9Y5I4 1007 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 MROH7Q68CQ1 1323 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3DA0A087WVF3 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3IA0A087WXS9 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3EA0A087X179 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3KA0A087X1G2 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3FA6NER0 549 aaPredicted RBP10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3LB9A6J9 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 NRP2O60462 931 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 LGR5O75473 907 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 ANXA5P08758 320 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3HP0C7X1 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 HNRNPLP14866 589 aaKnown RBP eCLIP10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 GP5P40197 560 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TNFSF9P41273 254 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 PPIDQ08752 370 aaKnown RBP10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 DGUOKQ16854 277 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3GQ6DHY5 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3CQ6IPX1 549 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 TBC1D3Q8IZP1 549 aaPredicted RBP10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 KAT5Q92993 513 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 CAB39LQ9H9S4 337 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 COMMD9Q9P000 198 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.8
NOTCH2-201ENST00000256646 RNF17Q9BXT8 1623 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ATP5BP06576 529 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 VIL1P09327 827 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 HDCP19113 662 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 PSMD8P48556 350 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SLC6A3Q01959 620 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 DPYSL3Q14195 570 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 CDYL2Q8N8U2 506 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 RTFDC1Q9BY42 306 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 TMLHEQ9NVH6 421 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ANKRD6Q9Y2G4 727 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 TRPV2Q9Y5S1 764 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 TPST2O60704 377 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SERPINA4P29622 427 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 STARP49675 285 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 MAD2L1Q13257 205 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 DHRSXQ8N5I4 330 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 GLIS3Q8NEA6 775 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ING5Q8WYH8 240 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 FCRL4Q96PJ5 515 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ATP5F1P24539 256 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 CASP9P55211 416 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SLC15A2Q16348 729 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 NFE2Q16621 373 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ACTRT2Q8TDY3 377 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 MCMBPQ9BTE3 642 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 IMP3Q9NV31 184 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 TPRKBQ9Y3C4 175 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 A0A1W2PQ67 120 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SLCO1B7G3V0H7 640 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 PTPN1P18031 435 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SLC12A3P55017 1021 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 CARTPTQ16568 116 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ALYREFQ86V81 257 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ACTRT1Q8TDG2 376 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 WRAP53Q9BUR4 548 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 LRCH1Q9Y2L9 728 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ATP6AP2A0A1C7CYW4 349 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 KANSL1LA0AUZ9 987 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 KPNA5O15131 536 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 KPNA6O60684 536 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 MTRF1O75570 445 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ATP6AP2O75787 350 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 GRIA4P48058 902 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 IRF8Q02556 426 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 GFOD2Q3B7J2 385 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 XRRA1Q6P2D8 792 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 PRMT9Q6P2P2 845 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 KIAA0319LQ8IZA0 1049 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 CLIP4Q8N3C7 705 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 OSCP1Q8WVF1 389 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 BRD9Q9H8M2 597 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 DNMT3LQ9UJW3 386 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 GPC6Q9Y625 555 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 BIRC5O15392 142 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 ADCY6O43306 1168 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 CTBP1Q13363 440 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 GRB14Q14449 540 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 PSRC1Q6PGN9 363 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 KRT74Q7RTS7 529 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 NRSN1Q8IZ57 195 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SKA1Q96BD8 255 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 OR10H3O60404 316 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 RPL9P32969 192 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 USP46P62068 366 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 CYP4F8P98187 520 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 PRSS58Q8IYP2 241 aa10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 SUCOQ9UBS9 1254 aaKnown RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 POLR3HQ9Y535 204 aaPredicted RBP10.02□□□□□ -0.81
NOTCH2-201ENST00000256646 IKBKEQ14164 716 aa10.01□□□□□ -0.81
NOTCH2-201ENST00000256646 TARBP2Q15633 366 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms