RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 LINC00518Q8N0U6 118 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 C7orf31Q8N865 590 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 BANPQ8N9N5 519 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 HAS1Q92839 578 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 TNIP3Q96KP6 325 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 DEPDC7Q96QD5 511 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 TMEM168Q9H0V1 697 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 VPS37BQ9H9H4 285 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 FBXO8Q9NRD0 319 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
CCNA1-201ENST00000255465 TMEM39AQ9NV64 488 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 SYBUQ9NX95 663 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 TXNDC16Q9P2K2 825 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 COPG2Q9UBF2 871 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 TCEAL9Q9UHQ7 104 aa11.97□□□□□ -0.49
CCNA1-201ENST00000255465 IPO11Q9UI26 975 aaKnown RBP11.97□□□□□ -0.49
CCNA1-201ENST00000255465 IGKV6D-21A0A0A0MT36 114 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 WDR91A4D1P6 747 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 TBX3O15119 743 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 DNAJB5O75953 348 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 NADKO95544 446 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 CPNE6O95741 557 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 C7P10643 843 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ZNF26P17031 533 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 CYP3A5P20815 502 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 CD247P20963 164 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ADRA1DP25100 572 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 PTX3P26022 381 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 EEF1DP29692 281 aaKnown RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 PRIM2P49643 509 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 GK3PQ14409 553 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 SIX1Q15475 284 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 EFHC2Q5JST6 749 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 GPR107Q5VW38 600 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 Q8N9G6 341 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 KIAA0895Q8NCT3 520 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ABHD11Q8NFV4 315 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ENKURQ8TC29 256 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ALG3Q92685 438 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 APBB2Q92870 758 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ARHGEF26Q96DR7 871 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 TMEM80Q96HE8 168 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 OR51B5Q9H339 312 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 RNPEPQ9H4A4 650 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 IGSF5Q9NSI5 407 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 ERAP1Q9NZ08 941 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 MBD2Q9UBB5 411 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 PCDHA10Q9Y5I2 948 aa11.96□□□□□ -0.49
CCNA1-201ENST00000255465 A0A1W2PQ72 361 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ANKRD62A6NC57 917 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SAGE2PA6NJ88 616 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SDR42E2A6NKP2 422 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 FOXO6A8MYZ6 492 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 FSCN2O14926 492 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 KIAA0355O15063 1070 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SLITRK5O94991 958 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PTTG1O95997 202 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 HLA-DRAP01903 254 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 KRT7P08729 469 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 TRAPPC2P0DI81 140 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 TRAPPC2BP0DI82 140 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ACTN1P12814 892 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ABCB4P21439 1286 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 MCM7P33993 719 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 STAT5BP51692 787 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 VAC14Q08AM6 782 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ILF2Q12905 390 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 RAB39AQ14964 217 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CCDC142Q17RM4 750 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 RSBN1Q5VWQ0 802 aaPredicted RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SWSAP1Q6NVH7 229 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF544Q6NX49 715 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 XKRXQ6PP77 449 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 B3GNT9Q6UX72 402 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF704Q6ZNC4 412 aaPredicted RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PLPPR4Q7Z2D5 763 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ALYREFQ86V81 257 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 HORMAD1Q86X24 394 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ZC3H3Q8IXZ2 948 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 RAVER1Q8IY67 606 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PM20D2Q8IYS1 436 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PJA1Q8NG27 643 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PMEPA1Q969W9 287 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 NOL6Q9H6R4 1146 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 TBX21Q9UL17 535 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SCN5AQ14524 2016 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 UBE4BO95155 1302 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CENPXA8MT69 81 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ATP6V1G2-DDX39BF2Z307 99 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CHMP2AO43633 222 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PI15O43692 258 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms