RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 LAG3P18627 525 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 CES1P23141 567 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 AIF1P55008 147 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 NOGQ13253 232 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 DNAJC14Q6Y2X3 702 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 SIX5Q8N196 739 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 EFCAB3Q8N7B9 438 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 MAB21L3Q8N8X9 362 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 CERS2Q96G23 380 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 TBCDQ9BTW9 1192 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 MMADHCQ9H3L0 296 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 GSAPA4D1B5 854 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 URADA6NGE7 173 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 PAICSP22234 425 aaKnown RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 RAB10P61026 200 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 FMO1Q01740 532 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 PEX6Q13608 980 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 TXNDC11Q6PKC3 985 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 CACTIN-AS1Q8N1I8 211 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 MFSD14AQ96MC6 490 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 MBOAT7Q96N66 472 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 OXCT2Q9BYC2 517 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 HIPK3Q9H422 1215 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 CLUHO75153 1309 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 PIGNO95427 931 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 TSPAN19P0C672 248 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 TSHRP16473 764 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 LRRC38Q5VT99 294 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 NEPROQ6NW34 567 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ZFP1Q6P2D0 407 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 RNF44Q7L0R7 432 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 FAM124AQ86V42 546 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 PIGZQ86VD9 579 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 PTGR2Q8N8N7 351 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 C9orf16Q9BUW7 83 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 KCNK4Q9NYG8 393 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ANGPT4Q9Y264 503 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ACSM2AQ08AH3 577 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ECM1Q16610 540 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ACSM2BQ68CK6 577 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 MACC1Q6ZN28 852 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 RINLQ6ZS11 566 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 BNIPLQ7Z465 357 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 KRT73Q86Y46 540 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 LRRC49Q8IUZ0 686 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ZC3H7AQ8IWR0 971 aaKnown RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 REM2Q8IYK8 340 aaPredicted RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 DEFB118Q96PH6 123 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 GPR20Q99678 358 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 TM6SF2Q9BZW4 377 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SPRTNQ9H040 489 aaPredicted RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 SEMA6AQ9H2E6 1030 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 NXF3Q9H4D5 531 aaKnown RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 LINC00854A0A1B0GVQ3 168 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 APODP05090 189 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ZCCHC18P0CG32 403 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SELPP16109 830 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 MC4RP32245 332 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ABCG1P45844 678 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 GLUD2P49448 558 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 GRM3Q14832 879 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 PAGE2Q7Z2X7 111 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 CYP4X1Q8N118 509 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 NAT16Q8N8M0 369 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 BSNDQ8WZ55 320 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SLC25A23Q9BV35 468 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 PCDH12Q9NPG4 1184 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 PIK3C2AO00443 1686 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 hCG_1818297A0A087WSY0 165 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 EFCAB10A6NFE3 127 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ENO4A6NNW6 628 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 BUD23O43709 281 aaKnown RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 DNTTP04053 509 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 PRKCIP41743 596 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SULT2A1Q06520 285 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ITGA7Q13683 1181 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 TARBP2Q15633 366 aaKnown RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 GPR158Q5T848 1215 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 NEK10Q6ZWH5 1172 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 C12orf29Q8N999 325 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 MOSPD2Q8NHP6 518 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 GAS2L1Q99501 681 aaPredicted RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 TTPALQ9BTX7 342 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 TLR10Q9BXR5 811 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 CFAP97Q9P2B7 532 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ZNF232Q9UNY5 417 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SLC12A4Q9UP95 1085 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 LMO7Q8WWI1 1683 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 C15orf38-AP3S2A0A0A6YYH1 394 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 NPEPPSL1A6NEC2 478 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 YDJCA8MPS7 323 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 CBX2Q14781 532 aaPredicted RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 SAMD4BQ5PRF9 694 aaKnown RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 CDC73Q6P1J9 531 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 TATDN1Q6P1N9 297 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ARPINQ7Z6K5 226 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 FAM20CQ8IXL6 584 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 RAVER1Q8IY67 606 aaKnown RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 RDH11Q8TC12 318 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms