RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 RGS14O43566 566 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ITGA2P17301 1181 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 DEFA5Q01523 94 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 GRSF1Q12849 480 aaKnown RBP eCLIP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 IQSEC1Q6DN90 963 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ANO7Q6IWH7 933 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ERAP2Q6P179 960 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 SAMD3Q8N6K7 520 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 TBC1D13Q9NVG8 400 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 SLC25A13Q9UJS0 675 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 AP4E1Q9UPM8 1137 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ILVBLA1L0T0 632 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 TPP1O14773 563 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 NCAM1P13591 858 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ITGA3P26006 1051 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 MGAT1P26572 445 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 HALP42357 657 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 GUCA1AP43080 201 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ZNF829Q3KNS6 432 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 HSPBAP1Q96EW2 488 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 HOPXQ9BPY8 73 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ADGRE3Q9BY15 652 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 UNKQ9C0B0 810 aaKnown RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 DDIT4Q9NX09 232 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 FADS2O95864 444 aaKnown RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 TXNP10599 105 aaKnown RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ATP5F1P24539 256 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 YWHAZP63104 245 aaKnown RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ELP6Q0PNE2 266 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 PRKG2Q13237 762 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 IL18Q14116 193 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 DPYSL3Q14195 570 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 KCNA10Q16322 511 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ZNF613Q6PF04 617 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 SLFN11Q7Z7L1 901 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 PRELID2Q8N945 189 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 KAT8Q9H7Z6 458 aaKnown RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 XPNPEP3Q9NQH7 507 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 MAN1C1Q9NR34 630 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 RPS6KB2Q9UBS0 482 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 ADAM28Q9UKQ2 775 aa13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 G3V2T6 193 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 APOC4-APOC2K7ER74 178 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 AIREO43918 545 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 CRTAMO95727 393 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 APOC2P02655 101 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 IL1R1P14778 569 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 S100A2P29034 98 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 KLF10Q13118 480 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 METTL21CQ5VZV1 264 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 SULT1C3Q6IMI6 304 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ARMC8Q8IUR7 673 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 KATNAL2Q8IYT4 538 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ABRAQ8N0Z2 381 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 FAM136AQ96C01 138 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 MAGEL2Q9UJ55 1249 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ISPDA4D126 451 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 VDRP11473 427 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 PCNAP12004 261 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 PRKCIP41743 596 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 PLK1P53350 603 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 AQP4P55087 323 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 RIPPLY1Q0D2K3 151 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 C11orf96Q7Z7L8 435 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 SPATA2LQ8IUW3 424 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 PJA1Q8NG27 643 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 TMEM143Q96AN5 459 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 WDCPQ9H6R7 721 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 MAP3K20Q9NYL2 800 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 TBC1D24Q9ULP9 559 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 A0A087X1B8 175 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 CD4P01730 458 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 NPTX2P47972 431 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 MAPKAPK3Q16644 382 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 TXNDC11Q6PKC3 985 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ERLEC1Q96DZ1 483 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 C1GALT1C1Q96EU7 318 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 CLPTM1LQ96KA5 538 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 SLC38A2Q96QD8 506 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 GFM1Q96RP9 751 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 FICDQ9BVA6 458 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 CADM1Q9BY67 442 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 SLC6A15Q9H2J7 730 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ANKEF1Q9NU02 776 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 MED11Q9P086 117 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 MKLN1Q9UL63 735 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 TBX20Q9UMR3 447 aa13.26□□□□□ -0.29
PCDHGA3-201ENST00000253812 ASTN2O75129 1339 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms