RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RAB10P61026 200 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 KPNB1Q14974 876 aaKnown RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 ZNF789Q5FWF6 425 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 KIAA0930Q6ICG6 404 aaPredicted RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 NEPROQ6NW34 567 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 GPATCH11Q8N954 259 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 NSMCE1Q8WV22 266 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 NXNL1Q96CM4 212 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 SPATA17Q96L03 361 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 ATP13A1Q9HD20 1204 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 MAN1C1Q9NR34 630 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 FBXO5Q9UKT4 447 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 RPL26L1Q9UNX3 145 aaKnown RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 CDY1Q9Y6F8 540 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 MKI67P46013 3256 aaKnown RBP21.9■■□□□ 1.1
CLN6-201ENST00000249806 TBKBP1A7MCY6 615 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 ADAM12O43184 909 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 RAMP2O60895 175 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 MYCP01106 439 aaPredicted RBP21.9■■□□□ 1.1
CLN6-201ENST00000249806 STMN1P16949 149 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 DLG1Q12959 904 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 MSLNQ13421 630 aaPredicted RBP21.9■■□□□ 1.1
CLN6-201ENST00000249806 BFSP2Q13515 415 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 CNSTQ6PJW8 725 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 CFAP52Q8N1V2 620 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 ELMO2Q96JJ3 720 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 TSNARE1Q96NA8 513 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 LBHD1Q9BQE6 289 aaPredicted RBP21.9■■□□□ 1.1
CLN6-201ENST00000249806 UBE2OQ9C0C9 1292 aaKnown RBP21.9■■□□□ 1.1
CLN6-201ENST00000249806 CDH19Q9H159 772 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 ATF6P18850 670 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 AOC1P19801 751 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 TAS2R39P59534 338 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 TBCCQ15814 346 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 ZYG11AQ6WRX3 759 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 CRIPAKQ8N1N5 446 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 TEX26Q8N6G2 289 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 MAPK15Q8TD08 544 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 SCLYQ96I15 445 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 PRKD2Q9BZL6 878 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 DONSONQ9NYP3 566 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 UXTQ9UBK9 157 aaPredicted RBP21.9■■□□□ 1.1
CLN6-201ENST00000249806 SORCS3Q9UPU3 1222 aa21.9■■□□□ 1.1
CLN6-201ENST00000249806 SCN5AQ14524 2016 aa21.89■■□□□ 1.1
CLN6-201ENST00000249806 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.89■■□□□ 1.09
CLN6-201ENST00000249806 HEATR9A2RTY3 570 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 CCL22O00626 93 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 GRIA4P48058 902 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 ACSBG2Q5FVE4 666 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 SNX30Q5VWJ9 437 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 POU5F2Q8N7G0 328 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 ARRDC2Q8TBH0 407 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 SREK1Q8WXA9 508 aaKnown RBP21.89■■□□□ 1.09
CLN6-201ENST00000249806 SEPT8Q92599 483 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 FATE1Q969F0 183 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 CLPTM1LQ96KA5 538 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 GPR78Q96P69 363 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 TTPALQ9BTX7 342 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 VPS45Q9NRW7 570 aa21.89■■□□□ 1.09
CLN6-201ENST00000249806 TMEM114B3SHH9 223 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 TARM1B6A8C7 271 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 APOA4P06727 396 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 RPL17P18621 184 aaKnown RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 GNAZP19086 355 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 NCF2P19878 526 aaPredicted RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 CD151P48509 253 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 SERINC3Q13530 473 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 SLC9B1Q4ZJI4 515 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 RBM20Q5T481 1227 aaKnown RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 TSTD2Q5T7W7 516 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 LRRC8EQ6NSJ5 796 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 NPAS4Q8IUM7 802 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 ENDOVQ8N8Q3 282 aaKnown RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 TDRD5Q8NAT2 981 aaKnown RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 STYXQ8WUJ0 223 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 NDNQ99608 321 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 OMDQ99983 421 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 MMADHCQ9H3L0 296 aaPredicted RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 XPR1Q9UBH6 696 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 MCM8Q9UJA3 840 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 PLA2G4CQ9UP65 541 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 LAMA2P24043 3122 aaKnown RBP21.88■■□□□ 1.09
CLN6-201ENST00000249806 SLC38A8A6NNN8 435 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 MEI4A8MW99 385 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 ZDHHC11BP0C7U3 371 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 NAGLUP54802 743 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 SIRPB2Q5JXA9 342 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 LIPMQ5VYY2 423 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 EPGNQ6UW88 154 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 OR13J1Q8NGT2 312 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 FAM161BQ96MY7 647 aa21.88■■□□□ 1.09
CLN6-201ENST00000249806 MUSKO15146 869 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 TACR2P21452 398 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 MPSTP25325 297 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 MXRA7P84157 204 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 IL10RBQ08334 325 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 CFAP157Q5JU67 520 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 ANKS3Q6ZW76 656 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 PTAR1Q7Z6K3 402 aaPredicted RBP21.87■■□□□ 1.09
CLN6-201ENST00000249806 FBXO22Q8NEZ5 403 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms