RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 DMC1Q14565 340 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 PCSK7Q16549 785 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 PLEKHG6Q3KR16 790 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 ZNF697Q5TEC3 545 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 KIAA0930Q6ICG6 404 aaPredicted RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 TIFABQ6ZNK6 161 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 TPGS1Q6ZTW0 290 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 ARID3BQ8IVW6 561 aaPredicted RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.35□□□□□ -0.11
SDF2-201ENST00000247020 WFDC5Q8TCV5 224 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 IRF7Q92985 503 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 LMLNQ96KR4 655 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 FCRL3Q96P31 734 aaPredicted RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 TRIM56Q9BRZ2 755 aaKnown RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 SLC2A11Q9BYW1 496 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 SMG9Q9H0W8 520 aaKnown RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 SPHK2Q9NRA0 654 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 CHRAC1Q9NRG0 131 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 ABCB8Q9NUT2 735 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 OBP2AQ9NY56 170 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 MYO7AQ13402 2215 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 FAM47DPA6NHR8 397 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SCAMP3O14828 347 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 NDST3O95803 873 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 TPH1P17752 444 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 GP5P40197 560 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 MAPK8P45983 427 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 CSE1LP55060 971 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 AP1S1P61966 158 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 GUCY1A3Q02108 690 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SLC18A2Q05940 514 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 ILF2Q12905 390 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 LMAN2Q12907 356 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 PACS1Q6VY07 963 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 LEKR1Q6ZMV7 388 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 KCNMB4Q86W47 210 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 RASSF3Q86WH2 238 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 VN1R2Q8NFZ6 395 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 MRRFQ96E11 262 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 MFSD3Q96ES6 412 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 TRIB3Q96RU7 358 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 TREX1Q9NSU2 369 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 NKIRAS1Q9NYS0 192 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 TXNDC16Q9P2K2 825 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 LHX3Q9UBR4 397 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 TM9SF1O15321 606 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 TYROBPO43914 113 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SNAP91O60641 907 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SIN3BO75182 1162 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 ZWINTO95229 277 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 MT-ND3P03897 115 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 NMBRP28336 390 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 LSP1P33241 339 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SCNN1BP51168 640 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SULT2A1Q06520 285 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 IHHQ14623 411 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 POU6F1Q14863 301 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 SIRPB2Q5JXA9 342 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 CNTN4Q8IWV2 1026 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 LMNTD2Q8IXW0 634 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 TDHQ8IZJ6 230 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.34□□□□□ -0.11
SDF2-201ENST00000247020 RIN3Q8TB24 985 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 ACMSDQ8TDX5 336 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 ATXN2LQ8WWM7 1075 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 NSUN3Q9H649 340 aaKnown RBP14.34□□□□□ -0.11
SDF2-201ENST00000247020 NOD2Q9HC29 1040 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 KCNK9Q9NPC2 374 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 GDE1Q9NZC3 331 aa14.34□□□□□ -0.11
SDF2-201ENST00000247020 CHD9Q3L8U1 2897 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 CREB1P16220 341 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 KRT4P19013 534 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 SPRP35270 261 aaPredicted RBP14.33□□□□□ -0.12
SDF2-201ENST00000247020 CCNFP41002 786 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 RHOAP61586 193 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 UGP2Q16851 508 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 TEDDM1Q5T9Z0 273 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 GPR149Q86SP6 731 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 APCDD1Q8J025 514 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 TTC16Q8NEE8 873 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 ITFG1Q8TB96 612 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 SPOCK2Q92563 424 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 ISG20Q96AZ6 181 aaKnown RBP14.33□□□□□ -0.12
SDF2-201ENST00000247020 ZSWIM3Q96MP5 696 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 TDRD1Q9BXT4 1180 aaKnown RBP14.33□□□□□ -0.12
SDF2-201ENST00000247020 TRPV4Q9HBA0 871 aa14.33□□□□□ -0.12
SDF2-201ENST00000247020 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
SDF2-201ENST00000247020 MYOFQ9NZM1 2061 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.32□□□□□ -0.12
SDF2-201ENST00000247020 A0A1W2PPM1 405 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms