RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 KRT7P08729 469 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 DESP17661 470 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ENGP17813 658 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 CD27P26842 260 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 CYLC1P35663 651 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-201ENST00000230480 CDKN2BP42772 138 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 SLC1A1P43005 524 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 CSNK1DP48730 415 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 CSNK1EP49674 416 aaKnown RBP13.91□□□□□ -0.18
VEGFA-201ENST00000230480 VAV2P52735 878 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 LIMK1P53667 647 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 RHOAP61586 193 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ZNF284Q2VY69 593 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 FAM46CQ5VWP2 391 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 SEL1L3Q68CR1 1132 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 KCTD6Q8NC69 237 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 GANCQ8TET4 914 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 MAML1Q92585 1016 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ECHDC3Q96DC8 303 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 SLC6A18Q96N87 628 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 KLHL32Q96NJ5 620 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 TSGA13Q96PP4 275 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ZDHHC6Q9H6R6 413 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 IL21RQ9HBE5 538 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ITM2BQ9Y287 266 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 NCKAP1Q9Y2A7 1128 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 A0A1B0GTW7 788 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 C4orf47A7E2U8 309 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 C1QTNF3-AMACRE9PGA6 284 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KRIT1O00522 736 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 RAD51BO15315 384 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 BCAT2O15382 392 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KRT10P13645 584 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 ADRB3P13945 408 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 GM2AP17900 193 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 SDHBP21912 280 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 MSNP26038 577 aaKnown RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 GARSP41250 739 aaKnown RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 GEMIN4P57678 1058 aaKnown RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 SNRPD1P62314 119 aaKnown RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 CCZ1BP86790 482 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 CCZ1P86791 482 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 LMNB2Q03252 620 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 NSUN2Q08J23 767 aaKnown RBP eCLIP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KRT81Q14533 505 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 PUM1Q14671 1186 aaKnown RBP eCLIP13.9□□□□□ -0.184e-7■■■□□ 16.2
VEGFA-201ENST00000230480 PTPRRQ15256 657 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 LLGL1Q15334 1064 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 SHBQ15464 509 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 LRRC73Q5JTD7 316 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 WDR45BQ5MNZ6 344 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 C11orf63Q6NUN7 778 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 B4GALNT4Q76KP1 1039 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 DSG4Q86SJ6 1040 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 SRLQ86TD4 932 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 TRIM69Q86WT6 500 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 CNTD1Q8N815 330 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 ALG3Q92685 438 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KLK6Q92876 244 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 LRIG1Q96JA1 1093 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 GDAP1L1Q96MZ0 367 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 SMIM14Q96QK8 99 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KLF6Q99612 283 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-201ENST00000230480 CALN1Q9BXU9 219 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 KDM4CQ9H3R0 1056 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 LCMT1Q9UIC8 334 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.18
VEGFA-201ENST00000230480 TBC1D3DA0A087WVF3 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3IA0A087WXS9 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3EA0A087X179 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3KA0A087X1G2 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 A0A1B0GVT2 93 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 A0A1W2PQU0 124 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 LRRD1A4D1F6 860 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3FA6NER0 549 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-201ENST00000230480 LRRC72A6NJI9 287 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 MEI4A8MW99 385 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3LB9A6J9 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 ARHGAP33O14559 1287 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 KCNK3O14649 394 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 RNGTTO60942 597 aaKnown RBP13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3HP0C7X1 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 MAT2AP31153 395 aaKnown RBP13.89□□□□□ -0.19
VEGFA-201ENST00000230480 NOP2P46087 812 aaKnown RBP13.89□□□□□ -0.19
VEGFA-201ENST00000230480 GRIK2Q13002 908 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 LBRQ14739 615 aaKnown RBP13.89□□□□□ -0.19
VEGFA-201ENST00000230480 SPA17Q15506 151 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3GQ6DHY5 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 TBC1D3CQ6IPX1 549 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 AADACL2Q6P093 401 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 GDPD4Q6W3E5 623 aa13.89□□□□□ -0.19
VEGFA-201ENST00000230480 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms