RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ZNF563Q8TA94 476 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PURBQ96QR8 312 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 POLE3Q9NRF9 147 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 INTS7Q9NVH2 962 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ST3GAL5Q9UNP4 418 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PRKAB1Q9Y478 270 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ELFN1P0C7U0 828 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 RARAP10276 462 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PSEN1P49768 467 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 MZT2AQ6P582 158 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ZDHHC13Q8IUH4 622 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 TLE6Q9H808 572 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 DCLRE1BQ9H816 532 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 MED26O95402 600 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 GLUD1P00367 558 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF37AP17032 561 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 GABRR2P28476 465 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 MAP4K3Q8IVH8 894 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 AHI1Q8N157 1196 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ZBTB10Q96DT7 871 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 BTBD10Q9BSF8 475 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 C9orf16Q9BUW7 83 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 DCXO43602 365 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 CCNDBP1O95273 360 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PIGNO95427 931 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PSMD8P48556 350 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 DLG4P78352 724 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ATP1A4Q13733 1029 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 CAMK1Q14012 370 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ARMC3Q5W041 872 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 CDRT15Q96T59 188 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 RHOBTB2Q9BYZ6 727 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 F8VP50 259 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PSMD4P55036 377 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 RRP1BQ14684 758 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 RGMBQ6NW40 437 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF549Q6P9A3 640 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 BHLHE22Q8NFJ8 381 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 CDADC1Q9BWV3 514 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 CEP44Q9C0F1 390 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 BTRCQ9Y297 605 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 AKT2P31751 481 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 MAPK8P45983 427 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 FIGNQ5HY92 759 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 PAPD7Q5XG87 772 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 KRT74Q7RTS7 529 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 NRSN1Q8IZ57 195 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 CLN6Q9NWW5 311 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 FCHO1O14526 889 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ERAL1O75616 437 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 SLC25A14O95258 325 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 MAXP61244 160 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 MSLNQ13421 630 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 INO80DQ53TQ3 878 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 FAM151BQ6UXP7 276 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 PTGR2Q8N8N7 351 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 RAD51AP1Q96B01 352 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 CLIC5Q9NZA1 410 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ARMCX1Q9P291 453 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 IDH3BO43837 385 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ZSCAN5DPP0CG00 497 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 IGFALSP35858 605 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 CDK7P50613 346 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 SEC13P55735 322 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 SRP54P61011 504 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 BHLHB9Q6PI77 547 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 DCLRE1AQ6PJP8 1040 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 EEF1AKMT1Q8WVE0 214 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 CERS4Q9HA82 394 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 SLC35C2Q9NQQ7 365 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF510Q9Y2H8 683 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 GSTK1Q9Y2Q3 226 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 BIRC5O15392 142 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 GLI1P08151 1106 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 TSPAN8P19075 237 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 PKNOX1P55347 436 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 SLC38A2Q96QD8 506 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 COQ7Q99807 217 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 GRIP2Q9C0E4 1043 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 IMP3Q9NV31 184 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ASF1AQ9Y294 204 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 APOC4-APOC2K7ER74 178 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 SLC28A2O43868 658 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 STX11O75558 287 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 APOC2P02655 101 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 PIRTP0C851 137 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms