RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZC3HC1Q86WB0 502 aaKnown RBP15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 CCDC117Q8IWD4 279 aaPredicted RBP15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 DSELQ8IZU8 1212 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 FAR2Q96K12 515 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 NPAS2Q99743 824 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 OXSMQ9NWU1 459 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 SLC2A6Q9UGQ3 507 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 AKAP10O43572 662 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 ALDH1A3P47895 512 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 HCAR3P49019 387 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 CXCR3P49682 368 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 NOMO2Q5JPE7 1267 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 CYP2R1Q6VVX0 501 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 SH2D5Q6ZV89 423 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 TMEM135Q86UB9 458 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 SOCS4Q8WXH5 440 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 HDAC10Q969S8 669 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 TUBGCP3Q96CW5 907 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 PFDN4Q9NQP4 134 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 MIOSQ9NXC5 875 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 TCAF1Q9Y4C2 921 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 SNX13Q9Y5W8 968 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 RNF103-CHMP3A0A140T963 221 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 ADCY6O43306 1168 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 LTA4HP09960 611 aaKnown RBP15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 ITGAXP20702 1163 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 CDK18Q07002 472 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 THEMIS2Q5TEJ8 643 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 ZNF512Q96ME7 567 aaPredicted RBP15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 SUN2Q9UH99 717 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 NUP205Q92621 2012 aa15.11■□□□□ 0.01
UBE2D4-201ENST00000222402 MBLAC1A4D2B0 266 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 NCF1BA6NI72 391 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 NCF1CA8MVU1 366 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 CAPN14A8MX76 684 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 E5RI56 91 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 IRAK2O43187 625 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 GLP2RO95838 553 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 NCF1P14598 390 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 POLD3Q15054 466 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 PAQR9Q6ZVX9 377 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 APLFQ8IW19 511 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 PCYOX1LQ8NBM8 494 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 A0A087X1B8 175 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 E9PAM4 449 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 MATN3O15232 486 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 IGFBP6P24592 240 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 SLC1A2P43004 574 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 PSMD5Q16401 504 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 GSTA3Q16772 222 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 TAS2R42Q7RTR8 314 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 OR52K2Q8NGK3 314 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 IRGQQ8WZA9 623 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 PPP1R10Q96QC0 940 aaKnown RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 C1orf21Q9H246 121 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 WDR6Q9NNW5 1121 aaKnown RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 UXTQ9UBK9 157 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 APPL1Q9UKG1 709 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 CAPN8A6NHC0 703 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 LYNP07948 512 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 HARS2P49590 506 aaKnown RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 CCNHP51946 323 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 CDH13P55290 713 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 BTKQ06187 659 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 ALKAL1Q6UXT8 129 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 PBXIP1Q96AQ6 731 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 FBXO44Q9H4M3 255 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 TRIP11Q15643 1979 aa15.1■□□□□ 0.01
UBE2D4-201ENST00000222402 CD68P34810 354 aaPredicted RBP15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 GK5Q6ZS86 529 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 NUP93Q8N1F7 819 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 HEXDCQ8WVB3 486 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 EBF3Q9H4W6 596 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 PCDHB5Q9Y5E4 795 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 ZCWPW2A0A1B0GU75 182 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 TMEM233B4DJY2 109 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 PSMD12O00232 456 aaPredicted RBP15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 NR5A2O00482 541 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 HLA-DQB2P05538 268 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 CCNG1P51959 295 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 PURAQ00577 322 aaKnown RBP15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 POU4F1Q01851 419 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 GRIK3Q13003 919 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 FAM171A1Q5VUB5 890 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 CNSTQ6PJW8 725 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 NAPRTQ6XQN6 538 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 ACTRT2Q8TDY3 377 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 NRG4Q8WWG1 115 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 CASP10Q92851 521 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 MS4A4AQ96JQ5 239 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 NR1H4Q96RI1 486 aaPredicted RBP15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 TMEM209Q96SK2 561 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 GPR22Q99680 433 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 DRC3Q9H069 523 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 ANLNQ9NQW6 1124 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 MARCH2Q9P0N8 246 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 ZDHHC2Q9UIJ5 367 aa15.09■□□□□ 0.01
UBE2D4-201ENST00000222402 SLC45A1Q9Y2W3 748 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms