RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SAC3D1A6NKF1 404 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 PRRG1O14668 218 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 MRASO14807 208 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 DNAJB2P25686 324 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 LSM12Q3MHD2 195 aaKnown RBP13.73□□□□□ -0.21
RAB3D-201ENST00000222120 BPIFA1Q9NP55 256 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 MRPL40Q9NQ50 206 aaKnown RBP13.73□□□□□ -0.21
RAB3D-201ENST00000222120 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 LNPEPQ9UIQ6 1025 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
RAB3D-201ENST00000222120 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 HMOX2P30519 316 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 GLUD2P49448 558 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ZNF177Q13360 481 aaPredicted RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 TUSC3Q13454 348 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 MARCH8Q5T0T0 291 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 CLEC6AQ6EIG7 209 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 SKA1Q96BD8 255 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 SIKE1Q9BRV8 207 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 BTRCQ9Y297 605 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 H0Y626 953 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 PSMD12O00232 456 aaPredicted RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 KATNA1O75449 491 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ALDH2P05091 517 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ASGR1P07306 291 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ATP5F1P24539 256 aaPredicted RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 POU4F1Q01851 419 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 INTS6LQ5JSJ4 861 aaKnown RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 TRPC4APQ8TEL6 797 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 PRKD2Q9BZL6 878 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 FBXO44Q9H4M3 255 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 SIRPGQ9P1W8 387 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 PBX3P40426 434 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 PSEN1P49768 467 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 OXCT1P55809 520 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 CNSTQ6PJW8 725 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 PNPLA8Q9NP80 782 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 GDAP2Q9NXN4 497 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 GMIPQ9P107 970 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 TRMT6Q9UJA5 497 aaKnown RBP13.72□□□□□ -0.21
RAB3D-201ENST00000222120 ANKRD6Q9Y2G4 727 aa13.72□□□□□ -0.21
RAB3D-201ENST00000222120 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 GPR32O75388 356 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 E2F6O75461 281 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 GUCA1CO95843 209 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 PYGLP06737 847 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 PEX2P28328 305 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 RPL9P32969 192 aaKnown RBP13.71□□□□□ -0.21
RAB3D-201ENST00000222120 ETV4P43268 484 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 RALGDSQ12967 914 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 PCLAFQ15004 111 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 INSCQ1MX18 579 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 FRMD7Q6ZUT3 714 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 PTGR2Q8N8N7 351 aaPredicted RBP13.71□□□□□ -0.21
RAB3D-201ENST00000222120 CCDC126Q96EE4 140 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 TBATAQ96M53 351 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 PRPF18Q99633 342 aaKnown RBP13.71□□□□□ -0.21
RAB3D-201ENST00000222120 ING2Q9H160 280 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
RAB3D-201ENST00000222120 BAG5Q9UL15 447 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 E9PAM4 449 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.21
RAB3D-201ENST00000222120 MYL4P12829 197 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 GM2AP17900 193 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 ALDH1A3P47895 512 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 SLC11A2P49281 568 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 BLMHQ13867 455 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 GPR158Q5T848 1215 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 AMIGO2Q86SJ2 522 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 CARNMT1Q8N4J0 409 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 CCDC138Q96M89 665 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 CCT7Q99832 543 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 ATP13A1Q9HD20 1204 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 TLR8Q9NR97 1041 aaKnown RBP13.71□□□□□ -0.21
RAB3D-201ENST00000222120 MIOSQ9NXC5 875 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 VTI1BQ9UEU0 232 aa13.71□□□□□ -0.21
RAB3D-201ENST00000222120 THSD7AQ9UPZ6 1657 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 C2orf81A6NN90 581 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 STX16-NPEPL1H3BU86 382 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 MAGEC1O60732 1142 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 SMNDC1O75940 238 aaKnown RBP eCLIP13.71□□□□□ -0.22
RAB3D-201ENST00000222120 AHSGP02765 367 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.22
RAB3D-201ENST00000222120 PPARGP37231 505 aaPredicted RBP13.71□□□□□ -0.22
RAB3D-201ENST00000222120 RAB27AP51159 221 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 NPWQ8N729 165 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 PPP1R2P1Q96PQ5 205 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 S100A14Q9HCY8 104 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 PKP3Q9Y446 797 aa13.71□□□□□ -0.22
RAB3D-201ENST00000222120 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms