RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CCDC126Q96EE4 140 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 IL12RB2Q99665 862 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 TRIM62Q9BVG3 475 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 MRPL1Q9BYD6 325 aaKnown RBP13.46□□□□□ -0.26
SRP54-201ENST00000216774 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.26
SRP54-201ENST00000216774 GLOD4Q9HC38 313 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 CSNK1G1Q9HCP0 422 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 HTR7P34969 479 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 CD151P48509 253 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 GEMP55040 296 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 PTK2BQ14289 1009 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 R3HDM1Q15032 1099 aaKnown RBP13.45□□□□□ -0.26
SRP54-201ENST00000216774 MAPRE2Q15555 327 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
SRP54-201ENST00000216774 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 CHSY3Q70JA7 882 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 TAC4Q86UU9 113 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 SCML4Q8N228 414 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 TXNDC5Q8NBS9 432 aaKnown RBP13.45□□□□□ -0.26
SRP54-201ENST00000216774 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 PKP2Q99959 881 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 ENTPD7Q9NQZ7 604 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 HACD3Q9P035 362 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 SUCOQ9UBS9 1254 aaKnown RBP13.45□□□□□ -0.26
SRP54-201ENST00000216774 NEU3Q9UQ49 428 aa13.45□□□□□ -0.26
SRP54-201ENST00000216774 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 H0YJX3 145 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 DFFAO00273 331 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 PGM3O95394 542 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 ADRA1AP35348 466 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 SLC1A2P43004 574 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 PGGT1BP53609 377 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 STX5Q13190 355 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 ZNF460Q14592 562 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 PSMD5Q16401 504 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 KIAA0930Q6ICG6 404 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 ESRP1Q6NXG1 681 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 KIAA0408Q6ZU52 694 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 IPMKQ8NFU5 416 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 USP33Q8TEY7 942 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 RNF34Q969K3 372 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 ELMO2Q96JJ3 720 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 MARK4Q96L34 752 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 NDNQ99608 321 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 FICDQ9BVA6 458 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 FTHL17Q9BXU8 183 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 POMKQ9H5K3 350 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 TREX1Q9NSU2 369 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 PTTG2Q9NZH5 202 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 LZTS1Q9Y250 596 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 SHROOM3Q8TF72 1996 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 TMEM233B4DJY2 109 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 STX16-NPEPL1H3BU86 382 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 MATN3O15232 486 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 FGF10O15520 208 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 TREHO43280 583 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 MT-CYBP00156 380 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 TFAP2AP05549 437 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 ETS2P15036 469 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 PCSK1P29120 753 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 MSX2P35548 267 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 SLC12A2P55011 1212 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 TAS2R39P59534 338 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 BEND5Q7L4P6 421 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 CTU1Q7Z7A3 348 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 ARHGAP12Q8IWW6 846 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 RNF148Q8N7C7 305 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 TMEM102Q8N9M5 508 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 HEXDCQ8WVB3 486 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 TMA16Q96EY4 203 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 KLHL32Q96NJ5 620 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 NPAS2Q99743 824 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 EML4Q9HC35 981 aaKnown RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 ARHGEF38Q9NXL2 777 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
SRP54-201ENST00000216774 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.44□□□□□ -0.26
SRP54-201ENST00000216774 HAS3O00219 553 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 IGLV3-25P01717 112 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 C8BP07358 591 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 FAM58BPP0C7Q3 252 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 CPB1P15086 417 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 HOXC13P31276 330 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 PSEN2P49810 448 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 RPS6KA3P51812 740 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 SULT2A1Q06520 285 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 SQLEQ14534 574 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 FAM83EQ2M2I3 478 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 SLC5A9Q2M3M2 681 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 ZNF470Q6ECI4 717 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 DQX1Q8TE96 717 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms