RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 KLF16Q9BXK1 252 aaPredicted RBP30■■■□□ 2.39
PABPN1-201ENST00000216727 RNF38Q9H0F5 515 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 MAFFQ9ULX9 164 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 NUMBLQ9Y6R0 609 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 EPOP01588 193 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 ATXN1LP0C7T5 689 aaKnown RBP30■■■□□ 2.39
PABPN1-201ENST00000216727 GMPRP36959 345 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 SLC1A2P43004 574 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 CTBP1Q13363 440 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 USP10Q14694 798 aaKnown RBP30■■■□□ 2.39
PABPN1-201ENST00000216727 CTC1Q2NKJ3 1217 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 SIRPB2Q5JXA9 342 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 ADGRF1Q5T601 910 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 NEPROQ6NW34 567 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 TCEAL8Q8IYN2 117 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 OR6Y1Q8NGX8 325 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 GKN1Q9NS71 199 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 TLK1Q9UKI8 766 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 MROH6A6NGR9 719 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 TIMP1P01033 207 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 T-ENOLP0DO92 83 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 RPS24P62847 133 aaKnown RBP29.99■■■□□ 2.39
PABPN1-201ENST00000216727 KCNJ2P63252 427 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 ELF3P78545 371 aaPredicted RBP29.99■■■□□ 2.39
PABPN1-201ENST00000216727 MPP1Q00013 466 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 IRF9Q00978 393 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 BBS5Q8N3I7 341 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 GABPB2Q8TAK5 448 aaPredicted RBP29.99■■■□□ 2.39
PABPN1-201ENST00000216727 CALML6Q8TD86 181 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 FEM1CQ96JP0 617 aa29.99■■■□□ 2.39
PABPN1-201ENST00000216727 E2F8A0AVK6 867 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 MUSKO15146 869 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 APOA4P06727 396 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 COL6A2P12110 1019 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 SERPINB3P29508 390 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 SLC1A6P48664 564 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 WDR5P61964 334 aaKnown RBP29.98■■■□□ 2.39
PABPN1-201ENST00000216727 TWF1Q12792 350 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 DNAJB7Q7Z6W7 309 aaPredicted RBP29.98■■■□□ 2.39
PABPN1-201ENST00000216727 GPR65Q8IYL9 337 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 LRMDAQ9H2I8 198 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 NMRAL1Q9HBL8 299 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 ILVBLA1L0T0 632 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 TTC24A2A3L6 582 aaPredicted RBP29.98■■■□□ 2.39
PABPN1-201ENST00000216727 PRRG1O14668 218 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 RALBP11234 206 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 HNRNPH1P31943 449 aaKnown RBP29.98■■■□□ 2.39
PABPN1-201ENST00000216727 ELF1P32519 619 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 SLC14A2Q15849 920 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 ZNF470Q6ECI4 717 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 RAPH1Q70E73 1250 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 SETD3Q86TU7 594 aaPredicted RBP29.98■■■□□ 2.39
PABPN1-201ENST00000216727 OR7D4Q8NG98 312 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 OR52K2Q8NGK3 314 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 MGME1Q9BQP7 344 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 C1QTNF1Q9BXJ1 281 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 MID2Q9UJV3 735 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 FBXO5Q9UKT4 447 aa29.98■■■□□ 2.39
PABPN1-201ENST00000216727 AGO1Q9UL18 857 aaKnown RBP29.98■■■□□ 2.39
PABPN1-201ENST00000216727 C2orf78A6NCI8 922 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 KDELR3O43731 214 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 MGRN1O60291 552 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 HNRNPCL1O60812 293 aaKnown RBP29.97■■■□□ 2.39
PABPN1-201ENST00000216727 HLA-DPA1P20036 260 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 TARSP26639 723 aaKnown RBP29.97■■■□□ 2.39
PABPN1-201ENST00000216727 CD151P48509 253 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 SLC12A1Q13621 1099 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 IL31Q6EBC2 164 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 OR13J1Q8NGT2 312 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 INPP5DQ92835 1189 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 DDX50Q9BQ39 737 aaKnown RBP29.97■■■□□ 2.39
PABPN1-201ENST00000216727 TUBB6Q9BUF5 446 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 SEPT3Q9UH03 358 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 STOML2Q9UJZ1 356 aa29.97■■■□□ 2.39
PABPN1-201ENST00000216727 A0A1B0GVM2 712 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 TCAF2A6NFQ2 919 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 G3V2L1 256 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 ATP5BP06576 529 aaKnown RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 CSF2RAP15509 400 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 ITGB8P26012 769 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 RASSF2P50749 326 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 ZBTB16Q05516 673 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 HSF5Q4G112 596 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 FAM91A1Q658Y4 838 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 PIWIL2Q8TC59 973 aaKnown RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 PSKH2Q96QS6 385 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 WWP1Q9H0M0 922 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 TRIM33Q9UPN9 1127 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 TBC1D30Q9Y2I9 924 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 FGF1P05230 155 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 SLC35E2BP0CK96 405 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 EPHB3P54753 998 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 ZNF177Q13360 481 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 RFTN1Q14699 578 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 LRRC26Q2I0M4 334 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 GALNT7Q86SF2 657 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 TNS4Q8IZW8 715 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 RDH11Q8TC12 318 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 PEX13Q92968 403 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms