RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 DGCR6Q14129 220 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 USP45Q70EL2 814 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 TRAPPC5Q8IUR0 188 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 FNIP1Q8TF40 1166 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 NACC2Q96BF6 587 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 KRCC1Q9NPI7 259 aaPredicted RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 ARL8BQ9NVJ2 186 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 VWA7Q9Y334 891 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 MTF2Q9Y483 593 aaPredicted RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 IPPQ9Y573 584 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 FAM155BO75949 473 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 EPN2O95208 641 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 COX7A2P14406 83 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 CHN2P52757 468 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 PRKG2Q13237 762 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 C9orf57Q5W0N0 161 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 RD3Q7Z3Z2 195 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 DENND1CQ8IV53 801 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 ADHFE1Q8IWW8 467 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 C1orf127Q8N9H9 656 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 PTCD3Q96EY7 689 aaKnown RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 KLHL5Q96PQ7 755 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 C12orf65Q9H3J6 166 aaKnown RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 FAM105AQ9NUU6 356 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 SMIM28A0A1B0GU29 152 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 TRIM38O00635 465 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 TRIM24O15164 1050 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 SERPINI2O75830 405 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 MLYCDO95822 493 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 PABPC1P11940 636 aaKnown RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 MAPK11Q15759 364 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 ZIK1Q3SY52 487 aaPredicted RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 NOMO2Q5JPE7 1267 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 CASP12Q6UXS9 341 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 HEATR4Q86WZ0 1026 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 RHOJQ9H4E5 214 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 WDR55Q9H6Y2 383 aaPredicted RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 REEP1Q9H902 201 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 LEF1Q9UJU2 399 aaPredicted RBP12.12□□□□□ -0.47
TRO-201ENST00000173898 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 CLUHO75153 1309 aa12.12□□□□□ -0.47
TRO-201ENST00000173898 KCNH1O95259 989 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 CYP2A6P11509 494 aaPredicted RBP12.11□□□□□ -0.47
TRO-201ENST00000173898 PTPN3P26045 913 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 PSEN1P49768 467 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 PDK3Q15120 406 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 CEP78Q5JTW2 689 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 AMIGO2Q86SJ2 522 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 GSTCDQ8NEC7 633 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRO-201ENST00000173898 AGPSO00116 658 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 IDH2P48735 452 aaKnown RBP12.11□□□□□ -0.47
TRO-201ENST00000173898 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 SETMARQ53H47 684 aaPredicted RBP12.11□□□□□ -0.47
TRO-201ENST00000173898 ALFQ53S48 1182 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 ARMC4Q5T2S8 1044 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 LBX2Q6XYB7 198 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 SPG21Q9NZD8 308 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 KLHL3Q9UH77 587 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 GTF2A1LQ9UNN4 478 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
TRO-201ENST00000173898 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 BCL9LQ86UU0 1499 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 TCF3P15923 654 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 MSX2P35548 267 aaPredicted RBP12.11□□□□□ -0.47
TRO-201ENST00000173898 FSTL1Q12841 308 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 SFSWAPQ12872 951 aaKnown RBP12.11□□□□□ -0.47
TRO-201ENST00000173898 GRIK3Q13003 919 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 SGCGQ13326 291 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 TEX44Q53QW1 395 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 DOK6Q6PKX4 331 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 GCNT7Q6ZNI0 430 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 VN1R5Q7Z5H4 357 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 ECHDC2Q86YB7 292 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 GRIN3AQ8TCU5 1115 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 RNFT2Q96EX2 444 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 TEKT5Q96M29 485 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 CLIC5Q9NZA1 410 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 STK39Q9UEW8 545 aa12.11□□□□□ -0.47
TRO-201ENST00000173898 CD3EAPO15446 510 aaKnown RBP12.1□□□□□ -0.47
TRO-201ENST00000173898 MAP3K13O43283 966 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 TLR5O60602 858 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 TTC23Q5W5X9 447 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 AFTPHQ6ULP2 937 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 SPESP1Q6UW49 350 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 TSHZ1Q6ZSZ6 1077 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 SH3BP5LQ7L8J4 393 aa12.1□□□□□ -0.47
TRO-201ENST00000173898 LUZP2Q86TE4 346 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms