RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 GBA3Q9H227 469 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 ZBTB26Q9HCK0 441 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 OSER1Q9NX31 292 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 NRCAMQ92823 1304 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 CASQ2O14958 399 aaPredicted RBP10.82□□□□□ -0.68
USP28-201ENST00000003302 PABPC4LP0CB38 370 aaKnown RBP10.82□□□□□ -0.68
USP28-201ENST00000003302 SPRP35270 261 aaPredicted RBP10.82□□□□□ -0.68
USP28-201ENST00000003302 GSTA3Q16772 222 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 C6orf163Q5TEZ5 329 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 LRRC8EQ6NSJ5 796 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 LIMS2Q7Z4I7 341 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 FAM35AQ86V20 835 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 ESAMQ96AP7 390 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 HNRNPABQ99729 332 aaKnown RBP10.82□□□□□ -0.68
USP28-201ENST00000003302 TRPV6Q9H1D0 765 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 BFARQ9NZS9 450 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 FBXW11Q9UKB1 542 aa10.82□□□□□ -0.68
USP28-201ENST00000003302 DAB1O75553 588 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SLC25A27O95847 323 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 MX2P20592 715 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 CHN2P52757 468 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 POLD3Q15054 466 aaPredicted RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 TTC16Q8NEE8 873 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 STYXQ8WUJ0 223 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 MAML3Q96JK9 1138 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SENP8Q96LD8 212 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 FICDQ9BVA6 458 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 ILKAPQ9H0C8 392 aaPredicted RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 COQ10BQ9H8M1 238 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 PREBQ9HCU5 417 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 GTSE1Q9NYZ3 720 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 ADA2Q9NZK5 511 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 HUS1O60921 280 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 ALDOCP09972 364 aaKnown RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 GPR15P49685 360 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 TAF6P49848 677 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 LSAMPQ13449 338 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 NOTUMQ6P988 496 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 UNC93AQ86WB7 457 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 MFN1Q8IWA4 741 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 KYQ8NBH2 561 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 NCSTNQ92542 709 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 DCPSQ96C86 337 aaKnown RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 TRAPPC9Q96Q05 1148 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 RTKNQ9BST9 563 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SLC39A8Q9C0K1 460 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 POMKQ9H5K3 350 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 TRPC7Q9HCX4 862 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 PDP2Q9P2J9 529 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 EGFL7Q9UHF1 273 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 DSEQ9UL01 958 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 MIA3Q5JRA6 1907 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 TANC1Q9C0D5 1861 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 PDHXO00330 501 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 POMCP01189 267 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 PSMC3P17980 439 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SEPT6Q14141 434 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SPANXN3Q5MJ09 141 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 TWF2Q6IBS0 349 aaKnown RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 NAT16Q8N8M0 369 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 OR10T2Q8NGX3 314 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 NSMCE3Q96MG7 304 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 FAM95CA0A1B0GW59 222 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 RGSL1A5PLK6 1076 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 J3KR12 359 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 TBX18O95935 607 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 GSTA2P09210 222 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SCNN1GP51170 649 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 CYLC2Q14093 348 aaPredicted RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 CAPRIN1Q14444 709 aaKnown RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 TIGD5Q53EQ6 642 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 LIPMQ5VYY2 423 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 ADGRG6Q86SQ4 1221 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SDCCAG8Q86SQ7 713 aaPredicted RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 FUNDC1Q8IVP5 155 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 ANKRD13AQ8IZ07 590 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 HSFY1Q96LI6 401 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 TEX37Q96LM6 180 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 EIF2B3Q9NR50 452 aaKnown RBP10.81□□□□□ -0.68
USP28-201ENST00000003302 GDAP2Q9NXN4 497 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 SLAMF8Q9P0V8 285 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 IKZF3Q9UKT9 509 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 PSMD13Q9UNM6 376 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 CRYL1Q9Y2S2 319 aa10.81□□□□□ -0.68
USP28-201ENST00000003302 RALGAPA2Q2PPJ7 1873 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 PRSS51A0A1B0GVH4 220 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 ANKRD33BA6NCL7 494 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 TIPRLO75663 272 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 SOAT2O75908 522 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 HAPLN1P10915 354 aaPredicted RBP10.8□□□□□ -0.68
USP28-201ENST00000003302 ZFXP17010 805 aaPredicted RBP10.8□□□□□ -0.68
USP28-201ENST00000003302 CDKN2DP55273 166 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 ADGRE1Q14246 886 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 PYCR3Q53H96 274 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 C6orf10Q5SRN2 563 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 STXBP5Q5T5C0 1151 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 AAGABQ6PD74 315 aa10.8□□□□□ -0.68
USP28-201ENST00000003302 ZYG11AQ6WRX3 759 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms