RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 UGT1A8Q9HAW9 530 aa17.84■□□□□ 0.45
PHGDH-232ENST00000641947 MOCS1Q9NZB8 636 aa17.84■□□□□ 0.45
PHGDH-232ENST00000641947 VPS51Q9UID3 782 aa17.84■□□□□ 0.45
PHGDH-232ENST00000641947 VPS28Q9UK41 221 aa17.84■□□□□ 0.45
PHGDH-232ENST00000641947 ZNF197O14709 1029 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 FAM155BO75949 473 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 ALDH1A2O94788 518 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 GSTA2P09210 222 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 RARS2Q5T160 578 aaKnown RBP17.83■□□□□ 0.44
PHGDH-232ENST00000641947 ASTLQ6HA08 431 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-232ENST00000641947 ADGRD1Q6QNK2 874 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 LINC00523Q86TU6 105 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 TDHQ8IZJ6 230 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 RIBC1Q8N443 379 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-232ENST00000641947 MZB1Q8WU39 189 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 SLC44A1Q8WWI5 657 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 TIFAQ96CG3 184 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 ZNF778Q96MU6 729 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 PSKH2Q96QS6 385 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 BFARQ9NZS9 450 aa17.83■□□□□ 0.44
PHGDH-232ENST00000641947 PSMC3IPQ9P2W1 217 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-232ENST00000641947 INTS6Q9UL03 887 aaKnown RBP17.83■□□□□ 0.44
PHGDH-232ENST00000641947 COL4A3Q01955 1670 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 FAM159BA6NKW6 160 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 TCF3P15923 654 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 CR2P20023 1033 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 NPY2RP49146 381 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 PPP2R2AP63151 447 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 HYAL1Q12794 435 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 RASA2Q15283 850 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 TMEM135Q86UB9 458 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 RNF135Q8IUD6 432 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 PPP1R2P1Q96PQ5 205 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 CINPQ9BW66 212 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-232ENST00000641947 FSD1LQ9BXM9 530 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 CHRAC1Q9NRG0 131 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 VPS45Q9NRW7 570 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 SEPT3Q9UH03 358 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 WNT6Q9Y6F9 365 aa17.82■□□□□ 0.44
PHGDH-232ENST00000641947 ZCWPW2A0A1B0GU75 182 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 TMCC1O94876 653 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 MT-CO1P00395 513 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 PENKP01210 267 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 BMP8BP34820 402 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 MSLNQ13421 630 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 POU6F1Q14863 301 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 ELMSAN1Q6PJG2 1045 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 NPAS3Q8IXF0 933 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 SLC25A41Q8N5S1 370 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 PPM1NQ8N819 430 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 FIBINQ8TAL6 211 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 ATP2A3Q93084 1043 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 ZNF669Q96BR6 464 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 MFSD3Q96ES6 412 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 PKNOX2Q96KN3 472 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 IL22Q9GZX6 179 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 KIF9Q9HAQ2 790 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 NOD2Q9HC29 1040 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 SAMD15Q9P1V8 674 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 LHX3Q9UBR4 397 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 SOX13Q9UN79 622 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 RPS6KL1Q9Y6S9 549 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 CCDC78A2IDD5 438 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 ATXN1LP0C7T5 689 aaKnown RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 NMBRP28336 390 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 VIPR2P41587 438 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 RFTN1Q14699 578 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 TCEAL5Q5H9L2 206 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 TTC19Q6DKK2 380 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 MICALCLQ6ZW33 695 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 TRABD2AQ86V40 505 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 DCAF4L2Q8NA75 395 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 ST13P5Q8NFI4 369 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 CDCA3Q99618 268 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-232ENST00000641947 NAT9Q9BTE0 207 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 PPCSQ9HAB8 311 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 ARNT2Q9HBZ2 717 aa17.81■□□□□ 0.44
PHGDH-232ENST00000641947 DENND4AQ7Z401 1863 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 LOC285095A0A1B0GVY8 99 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 A0A1W2PPM1 405 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 K7ERQ8 282 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 USP1O94782 785 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 HLA-FP30511 346 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 MSH2P43246 934 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 ANKRD20A4Q4UJ75 823 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 SYCE2Q6PIF2 218 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 CCNJLQ8IV13 435 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 CTAGE3PQ8IX95 158 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 SRRM1Q8IYB3 904 aaKnown RBP17.8■□□□□ 0.44
PHGDH-232ENST00000641947 MDM1Q8TC05 714 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 IRF7Q92985 503 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 KIFC1Q9BW19 673 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 STMN4Q9H169 189 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-232ENST00000641947 DZANK1Q9NVP4 752 aa17.8■□□□□ 0.44
PHGDH-232ENST00000641947 FCF1Q9Y324 198 aaKnown RBP17.8■□□□□ 0.44
PHGDH-232ENST00000641947 FAM237BA0A1B0GVD1 139 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 NEDD8-MDP1E9PL57 170 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 SMAD6O43541 496 aaKnown RBP17.79■□□□□ 0.44
PHGDH-232ENST00000641947 POLBP06746 335 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 F7P08709 466 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms