RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SFTPA2Q8IWL1 248 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 SIX6OS1Q8N1H7 587 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 SDR16C5Q8N3Y7 309 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 GUF1Q8N442 669 aaKnown RBP9.92□□□□□ -0.82
PHGDH-212ENST00000641247 SH2D3CQ8N5H7 860 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 GOLGA5Q8TBA6 731 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 PMEPA1Q969W9 287 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 CCDC74AQ96AQ1 378 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 MIB2Q96AX9 1013 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 FEM1AQ9BSK4 669 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 LRRC61Q9BV99 259 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 IMPG2Q9BZV3 1241 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 HSD3B7Q9H2F3 369 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 EVA1BQ9NVM1 165 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 FANCLQ9NW38 375 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 CWC15Q9P013 229 aaKnown RBP9.92□□□□□ -0.82
PHGDH-212ENST00000641247 CTNND2Q9UQB3 1225 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 MAPK8IP1Q9UQF2 711 aa9.92□□□□□ -0.82
PHGDH-212ENST00000641247 SPENQ96T58 3664 aaKnown RBP9.92□□□□□ -0.82
PHGDH-212ENST00000641247 SPTAN1Q13813 2472 aaKnown RBP9.92□□□□□ -0.82
PHGDH-212ENST00000641247 UTP20O75691 2785 aaKnown RBP9.92□□□□□ -0.82
PHGDH-212ENST00000641247 BICDL2A1A5D9 508 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 TYW5A2RUC4 315 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 D6RAR5 112 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 PDXKO00764 312 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ALOX15BO15296 676 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 SNAP91O60641 907 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ZNF821O75541 412 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ADCY5O95622 1261 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 RPLP0P05388 317 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 TSHRP16473 764 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 COL8A1P27658 744 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 CCKBRP32239 447 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 STX17P56962 302 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 SLC8A3P57103 927 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 MCCD1P59942 119 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 PFN3P60673 137 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 CENPCQ03188 943 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 SULT2A1Q06520 285 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ZFP36L1Q07352 338 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 EIF3IQ13347 325 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 TCEA2Q15560 299 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 PRRT3Q5FWE3 981 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 BORAQ6PGQ7 559 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 FOXR2Q6PJQ5 311 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ERN2Q76MJ5 926 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 CHSY1Q86X52 802 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 DCP2Q8IU60 420 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 GOLGA6L1Q8N7Z2 621 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 UBR7Q8N806 425 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 IRGQQ8WZA9 623 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 PSMB7Q99436 277 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 DDX50Q9BQ39 737 aaKnown RBP9.91□□□□□ -0.82
PHGDH-212ENST00000641247 MIS12Q9H081 205 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ADNPQ9H2P0 1102 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 LRRN3Q9H3W5 708 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 TMEM8AQ9HCN3 771 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 NCKIPSDQ9NZQ3 722 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 GULP1Q9UBP9 304 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 GGT7Q9UJ14 662 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 TLR6Q9Y2C9 796 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 FADS3Q9Y5Q0 445 aa9.91□□□□□ -0.82
PHGDH-212ENST00000641247 ZFC3H1O60293 1989 aaKnown RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 IGLON5A6NGN9 336 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 LMO7DNF2Z398 122 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 H3BM21 787 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 K7EM74 188 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 RNF225M0QZC1 329 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 JMJD7P0C870 316 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 CD19P15391 556 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 RRM1P23921 792 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TNNT3P45378 269 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 RABIFP47224 123 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 CD97P48960 835 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 MAPK10P53779 464 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 MLLT10P55197 1068 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 SLC12A1Q13621 1099 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TPD52L1Q16890 204 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TTI2Q6NXR4 508 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 FBXL22Q6P050 247 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 CCDC117Q8IWD4 279 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 PHACTR4Q8IZ21 702 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 KYQ8NBH2 561 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TMIEQ8NEW7 156 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 WDR48Q8TAF3 677 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 NAT6Q93015 286 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 NKD1Q969G9 470 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 VOPP1Q96AW1 172 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 GFM1Q96RP9 751 aaKnown RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 CPEB1Q9BZB8 566 aaKnown RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TRIM5Q9C035 493 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 RAB20Q9NX57 234 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 SEPT10Q9P0V9 454 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 SIRPGQ9P1W8 387 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 SPASTQ9UBP0 616 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 APOBEC3BQ9UH17 382 aaKnown RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 IPO11Q9UI26 975 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms