RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CHRNA4P43681 627 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 SGSHP51688 502 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 LIMK2P53671 638 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 ERVFC1P60507 584 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 RFTN1Q14699 578 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-208ENST00000641023 FAM47EQ6ZV65 393 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 GAREM2Q75VX8 874 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 OR52K2Q8NGK3 314 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 TADA1Q96BN2 335 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 GCNAQ96QF7 691 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 IARS2Q9NSE4 1012 aaKnown RBP17.5■□□□□ 0.39
PHGDH-208ENST00000641023 UBA2Q9UBT2 640 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-208ENST00000641023 PRKAG3Q9UGI9 489 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 SEPT3Q9UH03 358 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 LSM7Q9UK45 103 aaKnown RBP17.5■□□□□ 0.39
PHGDH-208ENST00000641023 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-208ENST00000641023 ANAPC1Q9H1A4 1944 aa17.5■□□□□ 0.39
PHGDH-208ENST00000641023 TPP1O14773 563 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 TIMM44O43615 452 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CKMP06732 381 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 TYK2P29597 1187 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CDC25CP30307 473 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CTNNB1P35222 781 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CSE1LP55060 971 aaKnown RBP17.49■□□□□ 0.39
PHGDH-208ENST00000641023 ZNF783Q6ZMS7 281 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 MAB21L3Q8N8X9 362 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 MRPL43Q8N983 215 aaKnown RBP17.49■□□□□ 0.39
PHGDH-208ENST00000641023 HERVK_113Q902F9 699 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 PSKH2Q96QS6 385 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CINPQ9BW66 212 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-208ENST00000641023 MUC3BQ9H195 1237 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 MANSC1Q9H8J5 431 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 PHTF1Q9UMS5 762 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 STARD13Q9Y3M8 1113 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 RWDD3Q9Y3V2 267 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CCDC78A2IDD5 438 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 H0Y626 953 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 C1RP00736 705 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 SERPINF2P08697 491 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 NEFHP12036 1026 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 NUMBP49757 651 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 CYP4F8P98187 520 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 ALG1LQ6GMV1 187 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 SPATA21Q7Z572 469 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 TMC8Q8IU68 726 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 TMA16Q96EY4 203 aaKnown RBP17.49■□□□□ 0.39
PHGDH-208ENST00000641023 IFT43Q96FT9 208 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 RANBP9Q96S59 729 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 LRRC3Q9BY71 257 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 ACE2Q9BYF1 805 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-208ENST00000641023 DCDC2Q9UHG0 476 aa17.49■□□□□ 0.39
PHGDH-208ENST00000641023 LOC285095A0A1B0GVY8 99 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 TTC24A2A3L6 582 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 VAPBO95292 243 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 EPOP01588 193 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 SERPINB4P48594 390 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 SEPT6Q14141 434 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 UGP2Q16851 508 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 STXBP5Q5T5C0 1151 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 FSTL4Q6MZW2 842 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 ESRP1Q6NXG1 681 aaKnown RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 Q6ZNB5 142 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 HJURPQ8NCD3 748 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 ADAMTS19Q8TE59 1207 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 SPOCK2Q92563 424 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 MGME1Q9BQP7 344 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 MTIF3Q9H2K0 278 aaKnown RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 ASAH2Q9NR71 780 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 ZNF510Q9Y2H8 683 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 LCHNA4D1U4 455 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 C2orf71A6NGG8 1288 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 GOLGA8TH3BQL2 631 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 CBX4O00257 560 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 MUSKO15146 869 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 GREM1O60565 184 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 EDF1O60869 148 aaKnown RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 TBL1XO60907 577 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 GLRA3O75311 464 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 HADHAP40939 763 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 SLC7A9P82251 487 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 ZXDBP98169 803 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 CDK18Q07002 472 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 SF3A3Q12874 501 aaKnown RBP eCLIP17.48■□□□□ 0.391e-9■■■■□ 22.2
PHGDH-208ENST00000641023 CNGA3Q16281 694 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 PLPP4Q5VZY2 271 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 RNF219Q5W0B1 726 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 CXorf57Q6NSI4 855 aaKnown RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 KYAT3Q6YP21 454 aaKnown RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 SRLQ86TD4 932 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 C7orf61Q8IZ16 206 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 HS6ST3Q8IZP7 471 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 GABPB2Q8TAK5 448 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-208ENST00000641023 POF1BQ8WVV4 589 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 TREX1Q9NSU2 369 aa17.48■□□□□ 0.39
PHGDH-208ENST00000641023 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CHD5Q8TDI0 1954 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 TRAV19A0A0A6YYK7 116 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 A0A1W2PRU2 124 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms