RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PTK2BQ14289 1009 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 PPP1R3AQ16821 1122 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 ZNF792Q3KQV3 632 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 TSTD2Q5T7W7 516 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 TXNDC5Q8NBS9 432 aaKnown RBP16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 PDCD6IPQ8WUM4 868 aaKnown RBP16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 POMKQ9H5K3 350 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 EFCAB1Q9HAE3 211 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 TNFRSF12AQ9NP84 129 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
HNRNPU-228ENST00000640306 COL1A2P08123 1366 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 CSHL1Q14406 222 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PAN2Q504Q3 1202 aaKnown RBP16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 ITPRIPL1Q6GPH6 555 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 TWF2Q6IBS0 349 aaKnown RBP16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 CNSTQ6PJW8 725 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 AMIGO2Q86SJ2 522 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PGAM4Q8N0Y7 254 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 B4GALNT2Q8NHY0 566 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 STYXQ8WUJ0 223 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PCED1BQ96HM7 432 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PRICKLE1Q96MT3 831 aaPredicted RBP16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 CCDC28BQ9BUN5 200 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 FICDQ9BVA6 458 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 GMPR2Q9P2T1 348 aaKnown RBP16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 IPPQ9Y573 584 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 TCAF2A6NFQ2 919 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 VILLO15195 856 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 SMIM10L2AP0DMW4 78 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 SMIM10L2BP0DMW5 78 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 NPY2RP49146 381 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 TAS2R39P59534 338 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 NSUN2Q08J23 767 aaKnown RBP eCLIP16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 SEMA3BQ13214 749 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PCSK7Q16549 785 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 MARVELD2Q8N4S9 558 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PHF21BQ96EK2 531 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 HIC2Q96JB3 615 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 CNDP1Q96KN2 507 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 TRPC7Q9HCX4 862 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 NUDT5Q9UKK9 219 aa16.75■□□□□ 0.27
HNRNPU-228ENST00000640306 ATP6AP2A0A1C7CYW4 349 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 ATP6AP2O75787 350 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 KCNA5P22460 613 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 PITRM1Q5JRX3 1037 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 ZNF470Q6ECI4 717 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 BNIPLQ7Z465 357 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 ARHGAP22Q7Z5H3 698 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 KDM1BQ8NB78 822 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 ZMIZ2Q8NF64 920 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 EME1Q96AY2 570 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 SLC39A3Q9BRY0 314 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 VTA1Q9NP79 307 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 STMN1P16949 149 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 SLC1A2P43004 574 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 PDAP1Q13442 181 aaKnown RBP16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 SNX17Q15036 470 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 MYLK3Q32MK0 819 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 ZNF789Q5FWF6 425 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 RBM20Q5T481 1227 aaKnown RBP16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 NAPEPLDQ6IQ20 393 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 KLHDC10Q6PID8 442 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 RNF217Q8TC41 542 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 HEXDCQ8WVB3 486 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 HDAC11Q96DB2 347 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 MCMBPQ9BTE3 642 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 Q9H521 79 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 MID2Q9UJV3 735 aa16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 MTF2Q9Y483 593 aaPredicted RBP16.74■□□□□ 0.27
HNRNPU-228ENST00000640306 E7ENX8 843 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 CCL22O00626 93 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 TREHO43280 583 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 H2AFYO75367 372 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 RPL5P46777 297 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 RAB10P61026 200 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 GALNT2Q10471 571 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 PRPSAP1Q14558 356 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 ARL13BQ3SXY8 428 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 TRIM67Q6ZTA4 783 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 OR9I1Q8NGQ6 314 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 KLHL33A6NCF5 533 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 ANKRD33BA6NCL7 494 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 SDHDO14521 159 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 DENRO43583 198 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 PNPLA4P41247 253 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 NME5P56597 212 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 PPIL2Q13356 520 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 UBXN11Q5T124 520 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 FAM35AQ86V20 835 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 ZFP28Q8NHY6 868 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 GRIN3AQ8TCU5 1115 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 LRTOMTQ8WZ04 291 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 EZH1Q92800 747 aaPredicted RBP16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 KATNBL1Q9H079 304 aa16.73■□□□□ 0.27
HNRNPU-228ENST00000640306 OSBPL2Q9H1P3 480 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms