RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ARRDC3Q96B67 414 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 QKIQ96PU8 341 aaKnown RBP eCLIP13.39□□□□□ -0.27
GTF3A-209ENST00000640289 PSKH2Q96QS6 385 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 PRRX2Q99811 253 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
GTF3A-209ENST00000640289 RBM22Q9NW64 420 aaKnown RBP eCLIP13.39□□□□□ -0.27
GTF3A-209ENST00000640289 SERGEFQ9UGK8 458 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 RAPGEFL1Q9UHV5 662 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 R4GN57 208 aa13.39□□□□□ -0.27
GTF3A-209ENST00000640289 MYO18AQ92614 2054 aaKnown RBP13.38□□□□□ -0.27
GTF3A-209ENST00000640289 A0A1W2PP55 124 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 KPNA3O00505 521 aaPredicted RBP13.38□□□□□ -0.27
GTF3A-209ENST00000640289 PIGNO95427 931 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
GTF3A-209ENST00000640289 ADH1BP00325 375 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 FGGP02679 453 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 PRNPP04156 253 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 C7P10643 843 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 RBP3P10745 1247 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 CR2P20023 1033 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 RBL1P28749 1068 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 P2RY2P41231 377 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 SCNN1BP51168 640 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 TPMTP51580 245 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 RENBPP51606 427 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
GTF3A-209ENST00000640289 ZNF33AQ06730 810 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 XRCC4Q13426 336 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 DSG4Q86SJ6 1040 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 SRLQ86TD4 932 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 FAM124AQ86V42 546 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 BBS5Q8N3I7 341 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 AADATQ8N5Z0 425 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 CNTD1Q8N815 330 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 COG1Q8WTW3 980 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 MS4A14Q96JA4 679 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 OSBPL9Q96SU4 736 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 IL12RB2Q99665 862 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 MGME1Q9BQP7 344 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 FAM126AQ9BYI3 521 aaPredicted RBP13.38□□□□□ -0.27
GTF3A-209ENST00000640289 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 SMARCAL1Q9NZC9 954 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 USP36Q9P275 1121 aaKnown RBP13.38□□□□□ -0.27
GTF3A-209ENST00000640289 SNX12Q9UMY4 172 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 CKAP5Q14008 2032 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 NUP205Q92621 2012 aa13.38□□□□□ -0.27
GTF3A-209ENST00000640289 ZNF318Q5VUA4 2279 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 HACD1B0YJ81 288 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 HRO43593 1189 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 ZNF217O75362 1048 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 RNASEH2AO75792 299 aaKnown RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 NEBLO76041 1014 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 UGT2B4P06133 528 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 C5AR1P21730 350 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 BCKDHBP21953 392 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 PTPN3P26045 913 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 DRD3P35462 400 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 HSPA9P38646 679 aaKnown RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 CSNK1DP48730 415 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 DSC2Q02487 901 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 ZBTB16Q05516 673 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 RAD51Q06609 339 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 ITKQ08881 620 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 WASHC5Q12768 1159 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 SIX1Q15475 284 aaPredicted RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 USP39Q53GS9 565 aaKnown RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 SLC45A4Q5BKX6 768 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 FAM46CQ5VWP2 391 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 DARS2Q6PI48 645 aaKnown RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 CAMK1DQ8IU85 385 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 RASGEF1CQ8N431 466 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 HDDC3Q8N4P3 179 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 GANCQ8TET4 914 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 HTR3CQ8WXA8 447 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 PBKQ96KB5 322 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 NUDCD1Q96RS6 583 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 NAPGQ99747 312 aaPredicted RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 OMDQ99983 421 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 FAM86C1Q9NVL1 165 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 FBXL12Q9NXK8 326 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
GTF3A-209ENST00000640289 ATP8A1Q9Y2Q0 1164 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 HCN4Q9Y3Q4 1203 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 PCDHGA2Q9Y5H1 932 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 CACNA1IQ9P0X4 2223 aa13.37□□□□□ -0.27
GTF3A-209ENST00000640289 ZNF185O15231 689 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 LILRB5O75023 590 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms