RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 SUSD2Q9UGT4 822 aa16.09■□□□□ 0.17
SPIN3-233ENST00000640039 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
SPIN3-233ENST00000640039 WASF2Q9Y6W5 498 aa16.09■□□□□ 0.17
SPIN3-233ENST00000640039 ATXN2Q99700 1313 aaKnown RBP16.09■□□□□ 0.17
SPIN3-233ENST00000640039 TNRC6BQ9UPQ9 1833 aaKnown RBP16.08■□□□□ 0.17
SPIN3-233ENST00000640039 ZNF487B1APH4 448 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 PLK4O00444 970 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 KHNYNO15037 678 aaKnown RBP16.08■□□□□ 0.16
SPIN3-233ENST00000640039 PJA2O43164 708 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 MFSD11O43934 449 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 FSBPO95073 299 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 LMNB2Q03252 620 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 CNTN1Q12860 1018 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 NUMA1Q14980 2115 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 PAFAH1B3Q15102 231 aaKnown RBP16.08■□□□□ 0.16
SPIN3-233ENST00000640039 CYTH1Q15438 398 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 MYLK3Q32MK0 819 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 AASDHQ4L235 1098 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-233ENST00000640039 TMCO4Q5TGY1 634 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 NCBP2-AS2Q69YL0 99 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 NCEH1Q6PIU2 408 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 ARHGAP36Q6ZRI8 547 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 LRRC49Q8IUZ0 686 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 TP53INP2Q8IXH6 220 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 BBS5Q8N3I7 341 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 CEP76Q8TAP6 659 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 ZNF830Q96NB3 372 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-233ENST00000640039 ZNF599Q96NL3 588 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 RNF157Q96PX1 679 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 OSBPL1AQ9BXW6 950 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 LACRTQ9GZZ8 138 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 MIR1-1HGQ9H1L0 117 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 KDM4CQ9H3R0 1056 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 SMOC1Q9H4F8 434 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 LHX3Q9UBR4 397 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 SALL4Q9UJQ4 1053 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 PILRBQ9UKJ0 227 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 DUSP10Q9Y6W6 482 aa16.08■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3DA0A087WVF3 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3IA0A087WXS9 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3EA0A087X179 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3KA0A087X1G2 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3FA6NER0 549 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3LB9A6J9 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ARHGAP6O43182 974 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 CFIP05156 583 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3HP0C7X1 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ITGB7P26010 798 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 MAOBP27338 520 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 RENBPP51606 427 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ZNF235Q14590 738 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 GRM3Q14832 879 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 SF3A2Q15428 464 aaKnown RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 DUOXA1Q1HG43 343 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TRIM61Q5EBN2 209 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 AGBL4Q5VU57 503 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 KIAA0895LQ68EN5 471 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3GQ6DHY5 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3CQ6IPX1 549 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ERN2Q76MJ5 926 aaKnown RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 RFX6Q8HWS3 928 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TBC1D3Q8IZP1 549 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 DNASE2BQ8WZ79 361 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ARRDC3Q96B67 414 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 EXOC2Q96KP1 924 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 NUSAP1Q9BXS6 441 aaKnown RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TMEM74BQ9NUR3 256 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 SEPT3Q9UH03 358 aa16.07■□□□□ 0.16
SPIN3-233ENST00000640039 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 TPX2Q9ULW0 747 aaKnown RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.07■□□□□ 0.16
SPIN3-233ENST00000640039 MACROD2A1Z1Q3 448 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 APOL1O14791 398 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 PLRG1O43660 514 aaKnown RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 UGT2B4P06133 528 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 ZFXP17010 805 aaPredicted RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 MX2P20592 715 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 GKP32189 559 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 GARSP41250 739 aaKnown RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 NEK3P51956 506 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 LBRQ14739 615 aaKnown RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 ZNF805Q5CZA5 627 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 PIP5KL1Q5T9C9 394 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 PEAR1Q5VY43 1037 aaPredicted RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 TIGD7Q6NT04 549 aaPredicted RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 FBXL19Q6PCT2 694 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 LRRC8AQ8IWT6 810 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 PQLC3Q8N755 202 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 KIAA1524Q8TCG1 905 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 FAM131CQ96AQ9 280 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 BIRC7Q96CA5 298 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 HDAC8Q9BY41 377 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 TSGA10Q9BZW7 698 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 PREBQ9HCU5 417 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 HAUS2Q9NVX0 235 aa16.06■□□□□ 0.16
SPIN3-233ENST00000640039 EIF2B4Q9UI10 523 aaKnown RBP16.06■□□□□ 0.16
SPIN3-233ENST00000640039 A0A1B0GTW7 788 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms