RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
PTPN11-207ENST00000639857 ANKRD36A6QL64 1941 aa18■□□□□ 0.47
PTPN11-207ENST00000639857 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 SH3BP5O60239 455 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 TRIM16O95361 564 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 IGSF6O95976 241 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 TPM1P09493 284 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 RAD51Q06609 339 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 GRM3Q14832 879 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 DPYSL2Q16555 572 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 CA9Q16790 459 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 INAVAQ3KP66 663 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 ZNF805Q5CZA5 627 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 KIAA1161Q6NSJ0 714 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 FBXL19Q6PCT2 694 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 LAYNQ6UX15 382 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 LZTR1Q8N653 840 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 OR8K1Q8NGG5 319 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 FAM174AQ8TBP5 190 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 TEKT4Q8WW24 435 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 ARHGEF26Q96DR7 871 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 KCTD15Q96SI1 283 aaPredicted RBP17.99■□□□□ 0.47
PTPN11-207ENST00000639857 PDFQ9HBH1 243 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 GDF3Q9NR23 364 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 LCMT1Q9UIC8 334 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 PCOLCE2Q9UKZ9 415 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 PCDHB9Q9Y5E1 797 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 ACTL7AQ9Y615 435 aa17.99■□□□□ 0.47
PTPN11-207ENST00000639857 A0A1B0GTQ1 180 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 SSU72P8A0A1W2PR75 194 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 TLR4O00206 839 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 DAPK3O43293 454 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 CBFA2T3O75081 653 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 WNT1P04628 370 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 SIM1P81133 766 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 NFKBIBQ15653 356 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 SLC18A3Q16572 532 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 MYLK3Q32MK0 819 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 KCNT1Q5JUK3 1230 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 AFMIDQ63HM1 303 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 VSTM4Q8IW00 320 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 RYBPQ8N488 228 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 TMEM145Q8NBT3 493 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 BAHD1Q8TBE0 780 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 ELF4Q99607 663 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 CDC6Q99741 560 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 NUP85Q9BW27 656 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 UBA2Q9UBT2 640 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-207ENST00000639857 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
PTPN11-207ENST00000639857 A0A1W2PQU0 124 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 H0Y8X5 98 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 H3BRJ5 948 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 RNF103O00237 685 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 KRIT1O00522 736 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 TSPAN6O43657 245 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 PRAMEF11O60813 436 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 ERCC2P18074 760 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 HNRNPA2B1P22626 353 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 MAT2AP31153 395 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 ARL4AP40617 200 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 GRK6P43250 576 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 ARRB1P49407 418 aaPredicted RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 NXPH1P58417 271 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 RHOAP61586 193 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 RPS21P63220 83 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 DPYSQ14117 519 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 STAT4Q14765 748 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 TRIP6Q15654 476 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 ZNF284Q2VY69 593 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 TMEM259Q4ZIN3 620 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 CCDC122Q5T0U0 273 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 PARS2Q7L3T8 475 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 CPEB1Q9BZB8 566 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 KLC2Q9H0B6 622 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 ZNHIT6Q9NWK9 470 aaKnown RBP17.97■□□□□ 0.47
PTPN11-207ENST00000639857 UVRAGQ9P2Y5 699 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 WASF3Q9UPY6 502 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 FADS3Q9Y5Q0 445 aa17.97■□□□□ 0.47
PTPN11-207ENST00000639857 SPAARA0A1B0GVQ0 90 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 MYO1FO00160 1098 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 WNT9AO14904 365 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 PCDH8O95206 1070 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 AKT2P31751 481 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 SUOXP51687 545 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 RFTN1Q14699 578 aaPredicted RBP17.96■□□□□ 0.47
PTPN11-207ENST00000639857 TSR1Q2NL82 804 aaKnown RBP17.96■□□□□ 0.47
PTPN11-207ENST00000639857 GDPD4Q6W3E5 623 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 HCAR2Q8TDS4 363 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 SETD7Q8WTS6 366 aaKnown RBP17.96■□□□□ 0.47
PTPN11-207ENST00000639857 VOPP1Q96AW1 172 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
PTPN11-207ENST00000639857 CWC15Q9P013 229 aaKnown RBP17.96■□□□□ 0.47
PTPN11-207ENST00000639857 RCOR3Q9P2K3 495 aaPredicted RBP17.96■□□□□ 0.47
PTPN11-207ENST00000639857 TPRP12270 2363 aaKnown RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 C16orf96A6NNT2 1141 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 UGT2B4P06133 528 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 H2AFZP0C0S5 128 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms