RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 UGT1A10Q9HAW8 530 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 UGT1A8Q9HAW9 530 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 AAASQ9NRG9 546 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 RGPD1P0DJD0 1748 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 MT-CYBP00156 380 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-216ENST00000639300 LDLRP01130 860 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 LBPP18428 481 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 CLCN5P51795 746 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 BCL2L1Q07817 233 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 SLC20A2Q08357 652 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 GALNT3Q14435 633 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 HIST2H2ACQ16777 129 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-216ENST00000639300 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 ARHGAP15Q53QZ3 475 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 ZC3H12BQ5HYM0 836 aaKnown RBP14.57□□□□□ -0.08
SCARB2-216ENST00000639300 HIST2H2AA3Q6FI13 130 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 ZFP1Q6P2D0 407 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 POTEHQ6S545 545 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 DQX1Q8TE96 717 aaKnown RBP14.57□□□□□ -0.08
SCARB2-216ENST00000639300 DCUN1D5Q9BTE7 237 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 TEX12Q9BXU0 123 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 SH3BP4Q9P0V3 963 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 GIT1Q9Y2X7 761 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 VWA7Q9Y334 891 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 ROBO1Q9Y6N7 1651 aa14.57□□□□□ -0.08
SCARB2-216ENST00000639300 PTPRJQ12913 1337 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 YJEFN3A6XGL0 299 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 ZNF839A8K0R7 811 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 F8W810 466 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 PGM3O95394 542 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 POU1F1P28069 291 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 PTPN9P43378 593 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 CCL23P55773 120 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 HSPA14Q0VDF9 509 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 NET1Q7Z628 596 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 CMASQ8NFW8 434 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 GMLQ99445 158 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 COPG2Q9UBF2 871 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 PADI3Q9ULW8 664 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 EPB42P16452 691 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 PCED1BQ96HM7 432 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 MAML3Q96JK9 1138 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 MRPL57Q9BQC6 102 aaKnown RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 HMX1Q9NP08 348 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 STAU1O95793 577 aaKnown RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 HGFP14210 728 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 MON1AQ86VX9 555 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 CDYL2Q8N8U2 506 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 ATG16L2Q8NAA4 619 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 ERLEC1Q96DZ1 483 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 MCRS1Q96EZ8 462 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 RMND5AQ9H871 391 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 TMEM216Q9P0N5 145 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 KLQ9UEF7 1012 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 AP4S1Q9Y587 144 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 PPEF2O14830 753 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 SNRPB2P08579 225 aaKnown RBP14.56□□□□□ -0.08
SCARB2-216ENST00000639300 PIK3R1P27986 724 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 CDK18Q07002 472 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 AMIGO2Q86SJ2 522 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 CACUL1Q86Y37 369 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 SLC25A13Q9UJS0 675 aa14.56□□□□□ -0.08
SCARB2-216ENST00000639300 CLUHO75153 1309 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 FFAR3O14843 346 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 GPR42O15529 346 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 CSH1P0DML2 217 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 CSH2P0DML3 217 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 MLNP12872 115 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 PRKAR2AP13861 404 aaKnown RBP14.55□□□□□ -0.08
SCARB2-216ENST00000639300 GSSP48637 474 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 DUSP4Q13115 394 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 DLG2Q15700 870 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 HECTD3Q5T447 861 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 DCLRE1AQ6PJP8 1040 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 MTFMTQ96DP5 389 aaKnown RBP14.55□□□□□ -0.08
SCARB2-216ENST00000639300 RMND5BQ96G75 393 aaPredicted RBP14.55□□□□□ -0.08
SCARB2-216ENST00000639300 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 ASB8Q9H765 288 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 C5orf60A6NFR6 353 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 PIGRP01833 764 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 FGFR1P11362 822 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 PCNAP12004 261 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 MAPK10P53779 464 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 TAF10Q12962 218 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 SEMA5AQ13591 1074 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 GRM3Q14832 879 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 TDRPQ86YL5 185 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 PGBD3Q8N328 593 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 QKIQ96PU8 341 aaKnown RBP eCLIP14.55□□□□□ -0.084e-6■■□□□ 14.1
SCARB2-216ENST00000639300 SH3GL1Q99961 368 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 GEMIN8Q9NWZ8 242 aaKnown RBP14.55□□□□□ -0.08
SCARB2-216ENST00000639300 RHBDL2Q9NX52 303 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 COL1A2P08123 1366 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 DEAF1O75398 565 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms