RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TMEM145Q8NBT3 493 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 OR2AP1Q8NGE2 309 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 GATA6Q92908 595 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 BTBD6Q96KE9 485 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 EDEM3Q9BZQ6 932 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 GDF3Q9NR23 364 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 HPCAL4Q9UM19 191 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 FADS3Q9Y5Q0 445 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 KMT2BQ9UMN6 2715 aaPredicted RBP18.02■□□□□ 0.48
PNKP-230ENST00000638016 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.47
PNKP-230ENST00000638016 WASH4PA8MWX3 477 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 GOLGA6L19H0YKK7 550 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 J3KR12 359 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 SDC3O75056 442 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 LRCH4O75427 683 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 KRT37O76014 449 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 ITIH2P19823 946 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 TPM4P67936 248 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
PNKP-230ENST00000638016 HNRNPDQ14103 355 aaKnown RBP18.01■□□□□ 0.47
PNKP-230ENST00000638016 SETMARQ53H47 684 aaPredicted RBP18.01■□□□□ 0.47
PNKP-230ENST00000638016 CCDC157Q569K6 752 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 GLRX5Q86SX6 157 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 TP53INP2Q8IXH6 220 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 NPWQ8N729 165 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 MFSD2AQ8NA29 543 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 ISG20Q96AZ6 181 aaKnown RBP18.01■□□□□ 0.47
PNKP-230ENST00000638016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
PNKP-230ENST00000638016 ISCUQ9H1K1 167 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 CATSPERBQ9H7T0 1116 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 LHX3Q9UBR4 397 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 DMTF1Q9Y222 760 aa18.01■□□□□ 0.47
PNKP-230ENST00000638016 A0A1W2PQJ5 194 aa18■□□□□ 0.47
PNKP-230ENST00000638016 C16orf96A6NNT2 1141 aa18■□□□□ 0.47
PNKP-230ENST00000638016 PRAMEF26H0Y7S4 382 aa18■□□□□ 0.47
PNKP-230ENST00000638016 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
PNKP-230ENST00000638016 RAD51BO15315 384 aa18■□□□□ 0.47
PNKP-230ENST00000638016 GSRP00390 522 aa18■□□□□ 0.47
PNKP-230ENST00000638016 IL1R2P27930 398 aa18■□□□□ 0.47
PNKP-230ENST00000638016 EPHA8P29322 1005 aaPredicted RBP18■□□□□ 0.47
PNKP-230ENST00000638016 GRK6P43250 576 aa18■□□□□ 0.47
PNKP-230ENST00000638016 AIF1P55008 147 aa18■□□□□ 0.47
PNKP-230ENST00000638016 SERINC3Q13530 473 aa18■□□□□ 0.47
PNKP-230ENST00000638016 STAT4Q14765 748 aa18■□□□□ 0.47
PNKP-230ENST00000638016 SUZ12Q15022 739 aaKnown RBP18■□□□□ 0.47
PNKP-230ENST00000638016 CYTH1Q15438 398 aa18■□□□□ 0.47
PNKP-230ENST00000638016 SMTNL2Q2TAL5 461 aa18■□□□□ 0.47
PNKP-230ENST00000638016 MYLK3Q32MK0 819 aa18■□□□□ 0.47
PNKP-230ENST00000638016 TMEM259Q4ZIN3 620 aa18■□□□□ 0.47
PNKP-230ENST00000638016 PPP6R3Q5H9R7 873 aaPredicted RBP18■□□□□ 0.47
PNKP-230ENST00000638016 ERMARDQ5T6L9 678 aa18■□□□□ 0.47
PNKP-230ENST00000638016 TXNRD3NBQ6F5E7 133 aa18■□□□□ 0.47
PNKP-230ENST00000638016 PPP1R2P3Q6NXS1 205 aa18■□□□□ 0.47
PNKP-230ENST00000638016 FBXL19Q6PCT2 694 aa18■□□□□ 0.47
PNKP-230ENST00000638016 GCNT7Q6ZNI0 430 aa18■□□□□ 0.47
PNKP-230ENST00000638016 ARHGAP36Q6ZRI8 547 aa18■□□□□ 0.47
PNKP-230ENST00000638016 UMODL1-AS1Q8N2C9 162 aa18■□□□□ 0.47
PNKP-230ENST00000638016 OR13H1Q8NG92 308 aa18■□□□□ 0.47
PNKP-230ENST00000638016 SAP25Q8TEE9 199 aa18■□□□□ 0.47
PNKP-230ENST00000638016 ADAMTS14Q8WXS8 1223 aa18■□□□□ 0.47
PNKP-230ENST00000638016 ARHGEF26Q96DR7 871 aa18■□□□□ 0.47
PNKP-230ENST00000638016 PPP1R16AQ96I34 528 aa18■□□□□ 0.47
PNKP-230ENST00000638016 KLHL32Q96NJ5 620 aa18■□□□□ 0.47
PNKP-230ENST00000638016 XPO4Q9C0E2 1151 aaKnown RBP18■□□□□ 0.47
PNKP-230ENST00000638016 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
PNKP-230ENST00000638016 THAP2Q9H0W7 228 aa18■□□□□ 0.47
PNKP-230ENST00000638016 RETREG1Q9H6L5 497 aa18■□□□□ 0.47
PNKP-230ENST00000638016 LRRC19Q9H756 370 aa18■□□□□ 0.47
PNKP-230ENST00000638016 PDFQ9HBH1 243 aa18■□□□□ 0.47
PNKP-230ENST00000638016 A0A087X0T9 212 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 PIGNO95427 931 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 FAM228BP0C875 321 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 CLDN6P56747 220 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 RHOAP61586 193 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 SNRPD1P62314 119 aaKnown RBP17.99■□□□□ 0.47
PNKP-230ENST00000638016 SLC45A4Q5BKX6 768 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 ZNF805Q5CZA5 627 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 CPNE8Q86YQ8 564 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 ARHGAP12Q8IWW6 846 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 SLC22A18ASQ8N1D0 253 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 FNIP1Q8TF40 1166 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 SKA1Q96BD8 255 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 TPX2Q9ULW0 747 aaKnown RBP17.99■□□□□ 0.47
PNKP-230ENST00000638016 CAPN11Q9UMQ6 739 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 NEUROG3Q9Y4Z2 214 aa17.99■□□□□ 0.47
PNKP-230ENST00000638016 ANKRD36A6QL64 1941 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 FGF10O15520 208 aaPredicted RBP17.98■□□□□ 0.47
PNKP-230ENST00000638016 PRPSAP2O60256 369 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 RNF8O76064 485 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 PAK4O96013 591 aaPredicted RBP17.98■□□□□ 0.47
PNKP-230ENST00000638016 ITGAVP06756 1048 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 THEGLP0DJG4 465 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 DESP17661 470 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 ERCC2P18074 760 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 HNRNPA2B1P22626 353 aaKnown RBP17.98■□□□□ 0.47
PNKP-230ENST00000638016 CASP14P31944 242 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 RGRP47804 291 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 GEMIN4P57678 1058 aaKnown RBP17.98■□□□□ 0.47
PNKP-230ENST00000638016 YBEYP58557 167 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms