RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 DDX3XO00571 662 aaKnown RBP eCLIP15.25■□□□□ 0.037e-10■■■□□ 17.1
UBE3A-227ENST00000638011 MCAMP43121 646 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF177Q13360 481 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 IER5Q5VY09 327 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 HMBOX1Q6NT76 420 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ADAM33Q9BZ11 813 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 THAP2Q9H0W7 228 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 PLK2Q9NYY3 685 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 PRDM4Q9UKN5 801 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 TRAFD1O14545 582 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 MYCP01106 439 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 RLN2P04090 185 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 RPA1P27694 616 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 NUP205Q92621 2012 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 RSL1D1O76021 490 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 FAPQ12884 760 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 SMAD1Q15797 465 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 PIK3R6Q5UE93 754 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 SEMA6AQ9H2E6 1030 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 OR5F1O95221 314 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 HLA-DQA2P01906 255 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 GLI1P08151 1106 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 SLC6A2P23975 617 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 GRB14Q14449 540 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ZNHIT3Q15649 155 aaPredicted RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 UNKQ9C0B0 810 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 OPTCQ9UBM4 332 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 AP4E1Q9UPM8 1137 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 F5H5T6 163 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ATP5F1P24539 256 aaPredicted RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 AGMOQ6ZNB7 445 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 MTSS1LQ765P7 747 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 STAG3L4Q8TBR4 150 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 TCEAL3Q969E4 200 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 AGAP1Q9UPQ3 857 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 EML1O00423 815 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 RPS2P15880 293 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 PDIA6Q15084 440 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 HPS6Q86YV9 775 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ZBTB8BQ8NAP8 495 aaPredicted RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 TMEM159Q96B96 161 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 CYP4F12Q9HCS2 524 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 PDE2AO00408 941 aaPredicted RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 PCYOX1Q9UHG3 505 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 TMEM5Q9Y2B1 443 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 A0A096LPK6 155 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 FGFR2P21802 821 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 CCR3P51677 355 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 GOLGA7BQ2TAP0 167 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF567Q8N184 647 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF248Q8NDW4 579 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ADAM32Q8TC27 787 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 GTPBP2Q9BX10 602 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ARMCX1Q9P291 453 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 HLA-DRAP01903 254 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 POLR2LP62875 67 aaKnown RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 NELL1Q92832 810 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 RUSC1Q9BVN2 902 aa15.24■□□□□ 0.03
UBE3A-227ENST00000638011 SMPD3Q9NY59 655 aaPredicted RBP15.24■□□□□ 0.03
UBE3A-227ENST00000638011 ASCC3Q8N3C0 2202 aaKnown RBP15.23■□□□□ 0.03
UBE3A-227ENST00000638011 NUDT17P0C025 328 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 COX4I1P13073 169 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 ERI1Q8IV48 349 aaKnown RBP15.23■□□□□ 0.03
UBE3A-227ENST00000638011 CYP3A43Q9HB55 503 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 FBXO9Q9UK97 447 aaPredicted RBP15.23■□□□□ 0.03
UBE3A-227ENST00000638011 TMEM132BQ14DG7 1078 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 P2RY8Q86VZ1 359 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 ITGA11Q9UKX5 1188 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 PRAMEF33A0A0G2JMD5 474 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 CENPBD1B2RD01 187 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 PRAMEF10O60809 474 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 NFKB1P19838 968 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 GALK1P51570 392 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 GPSM1Q86YR5 675 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 SVOPLQ8N434 492 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 C1QTNF7Q9BXJ2 289 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 ANKRA2Q9H9E1 313 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 TDRKHQ9Y2W6 561 aaKnown RBP15.23■□□□□ 0.03
UBE3A-227ENST00000638011 TMEM121Q9BTD3 319 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 MARK1Q9P0L2 795 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 SDK1Q7Z5N4 2213 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 CABIN1Q9Y6J0 2220 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 SLC22A2O15244 555 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 RORAP35398 523 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 MILR1Q7Z6M3 343 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 S100PBPQ96BU1 408 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 MED8Q96G25 268 aa15.23■□□□□ 0.03
UBE3A-227ENST00000638011 KCTD15Q96SI1 283 aaPredicted RBP15.23■□□□□ 0.03
UBE3A-227ENST00000638011 E2F8A0AVK6 867 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms