RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 PCDHGA8Q9Y5G5 932 aa16.74■□□□□ 0.27
CLN3-255ENST00000637100 CHD5Q8TDI0 1954 aa16.74■□□□□ 0.27
CLN3-255ENST00000637100 COL6A6A6NMZ7 2263 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 TDRD6O60522 2096 aaKnown RBP16.73■□□□□ 0.27
CLN3-255ENST00000637100 AREL1O15033 823 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 SPINT1O43278 529 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 NEBLO76041 1014 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 MYF5P13349 255 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 TGM2P21980 687 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 MLLT3P42568 568 aaPredicted RBP16.73■□□□□ 0.27
CLN3-255ENST00000637100 RECQLP46063 649 aaPredicted RBP16.73■□□□□ 0.27
CLN3-255ENST00000637100 CCNHP51946 323 aaPredicted RBP16.73■□□□□ 0.27
CLN3-255ENST00000637100 TMPRSS3P57727 454 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 GNA12Q03113 381 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 EIF2B5Q13144 721 aaKnown RBP16.73■□□□□ 0.27
CLN3-255ENST00000637100 ZNF542PQ5EBM4 170 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 TFAP2DQ7Z6R9 452 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 ZNF605Q86T29 641 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 IFI44Q8TCB0 444 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 GRIN3AQ8TCU5 1115 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 TTC9Q92623 222 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 CENPTQ96BT3 561 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 SLC46A1Q96NT5 459 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 BOCQ9BWV1 1114 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 NAA15Q9BXJ9 866 aaKnown RBP16.73■□□□□ 0.27
CLN3-255ENST00000637100 ZYG11BQ9C0D3 744 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 PLCB1Q9NQ66 1216 aa16.73■□□□□ 0.27
CLN3-255ENST00000637100 MAST4O15021 2626 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 CDRT15L2A8MXV6 281 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 AQP9O43315 295 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 TCEA3O75764 348 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
CLN3-255ENST00000637100 CYP11B1P15538 503 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
CLN3-255ENST00000637100 NLRP14Q86W24 1093 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 SYNCQ9H7C4 482 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 THSD1Q9NS62 852 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 NEU3Q9UQ49 428 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 ENTPD2Q9Y5L3 495 aa16.72■□□□□ 0.27
CLN3-255ENST00000637100 C16orf96A6NNT2 1141 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 H3BM21 787 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 TOR1BO14657 336 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 FPGTO14772 594 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 LSM8O95777 96 aaKnown RBP16.71■□□□□ 0.27
CLN3-255ENST00000637100 ABL2P42684 1182 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 RNASE9P60153 205 aaKnown RBP16.71■□□□□ 0.27
CLN3-255ENST00000637100 MAN2A1Q16706 1144 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 FAM102AQ5T9C2 384 aaPredicted RBP16.71■□□□□ 0.27
CLN3-255ENST00000637100 BROXQ5VW32 411 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 PTAR1Q7Z6K3 402 aaPredicted RBP16.71■□□□□ 0.27
CLN3-255ENST00000637100 CLEC14AQ86T13 490 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 MAPK15Q8TD08 544 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 BTN2A2Q8WVV5 523 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 KCNE4Q8WWG9 221 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 VCPIP1Q96JH7 1222 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 ABCG4Q9H172 646 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 OSBPL2Q9H1P3 480 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 ATP13A1Q9HD20 1204 aa16.71■□□□□ 0.27
CLN3-255ENST00000637100 PNMA8BQ9ULN7 279 aaPredicted RBP16.71■□□□□ 0.27
CLN3-255ENST00000637100 IGLON5A6NGN9 336 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 SRGAP2O75044 1071 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 GSRP00390 522 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 ADRA1BP35368 520 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 ETFBP38117 255 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 YPEL5P62699 121 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 VAC14Q08AM6 782 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
CLN3-255ENST00000637100 PDE1CQ14123 709 aaPredicted RBP16.7■□□□□ 0.26
CLN3-255ENST00000637100 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
CLN3-255ENST00000637100 ZNF805Q5CZA5 627 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 GUSBP11Q6P575 273 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 MLKLQ8NB16 471 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 WDR48Q8TAF3 677 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 ARHGEF2Q92974 986 aaKnown RBP16.7■□□□□ 0.26
CLN3-255ENST00000637100 SPON2Q9BUD6 331 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 CPNE5Q9HCH3 593 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 NDFIP2Q9NV92 336 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 TMEM248Q9NWD8 314 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 FCF1Q9Y324 198 aaKnown RBP16.7■□□□□ 0.26
CLN3-255ENST00000637100 ACTL7AQ9Y615 435 aa16.7■□□□□ 0.26
CLN3-255ENST00000637100 LMO7DNF2Z398 122 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 K7ENP7 123 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 NTN3O00634 580 aaPredicted RBP16.69■□□□□ 0.26
CLN3-255ENST00000637100 GCATO75600 419 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 POP4O95707 220 aaKnown RBP16.69■□□□□ 0.26
CLN3-255ENST00000637100 RHOQP17081 205 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 JUNDP17535 347 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 ACVRL1P37023 503 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 MAPKAPK2P49137 400 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 GEMIN4P57678 1058 aaKnown RBP16.69■□□□□ 0.26
CLN3-255ENST00000637100 NOMO3P69849 1222 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 SGCGQ13326 291 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 KLHDC7AQ5VTJ3 777 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 INO80CQ6PI98 192 aaPredicted RBP16.69■□□□□ 0.26
CLN3-255ENST00000637100 EFL1Q7Z2Z2 1120 aaKnown RBP16.69■□□□□ 0.26
CLN3-255ENST00000637100 FAM131BQ86XD5 332 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 OR2AP1Q8NGE2 309 aa16.69■□□□□ 0.26
CLN3-255ENST00000637100 CENPIQ92674 756 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms