RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SAT1P21673 171 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 ARCN1P48444 511 aaKnown RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 RPL14P50914 215 aaKnown RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 TNK2Q07912 1038 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 RCN1Q15293 331 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 MUM1Q2TAK8 710 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 CLLU1OSQ5K130 101 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 ESRP1Q6NXG1 681 aaKnown RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 GALNT7Q86SF2 657 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 C14orf80Q86SX3 495 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 ULK2Q8IYT8 1036 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.27□□□□□ -0.44
CLN8-212ENST00000637083 SPPL2BQ8TCT7 592 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 STYXQ8WUJ0 223 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 CCDC126Q96EE4 140 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 TSPAN17Q96FV3 270 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 PGLYRP2Q96PD5 576 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 GATA5Q9BWX5 397 aaPredicted RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 C1QTNF1Q9BXJ1 281 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 COG4Q9H9E3 785 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 GPAMQ9HCL2 828 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 PRDM5Q9NQX1 630 aaPredicted RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 MRGBPQ9NV56 204 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 OSER1Q9NX31 292 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 MPP6Q9NZW5 540 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.27□□□□□ -0.44
CLN8-212ENST00000637083 FAM92AA1XBS5 289 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 HDAC3O15379 428 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 SLC35E2BP0CK96 405 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 ADSLP30566 484 aaPredicted RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 SERPINH1P50454 418 aaKnown RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 WNT3AP56704 352 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 AP2B1P63010 937 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 SP3Q02447 781 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 ITKQ08881 620 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 ELAVL2Q12926 359 aaKnown RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 SEPT6Q14141 434 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 DDR2Q16832 855 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 MS4A13Q5J8X5 152 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 MAP3K21Q5TCX8 1036 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 PIK3R6Q5UE93 754 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 LRRC8EQ6NSJ5 796 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 NEPROQ6NW34 567 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 ACAD11Q709F0 780 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 SETD3Q86TU7 594 aaPredicted RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 KIRREL3Q8IZU9 778 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 ZNF781Q8N8C0 355 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 C2orf15Q8WU43 125 aaKnown RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 SCG3Q8WXD2 468 aaKnown RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 DNAJC9Q8WXX5 260 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 FBXO32Q969P5 355 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 IMP4Q96G21 291 aaKnown RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 RETREG1Q9H6L5 497 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 NUDT5Q9UKK9 219 aa12.27□□□□□ -0.45
CLN8-212ENST00000637083 PRG3Q9Y2Y8 225 aaPredicted RBP12.27□□□□□ -0.45
CLN8-212ENST00000637083 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 IGLV3-10A0A075B6K4 115 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 LIN7AO14910 233 aaPredicted RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 NVLO15381 856 aaKnown RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 ACADSP16219 412 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 ATP6V1C1P21283 382 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 ABCG1P45844 678 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 GRIA4P48058 902 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 CLCN5P51795 746 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 YBEYP58557 167 aaPredicted RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 ACTR3P61158 418 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 RING1Q06587 406 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 IL10RBQ08334 325 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 EFEMP1Q12805 493 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 CNGA3Q16281 694 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 PARP15Q460N3 678 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 SEL1L3Q68CR1 1132 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 AAGABQ6PD74 315 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 KDELC1Q6UW63 502 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 MAVSQ7Z434 540 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 SLC41A1Q8IVJ1 513 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 FSTL5Q8N475 847 aaPredicted RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 AFAP1L2Q8N4X5 818 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 ELMO2Q96JJ3 720 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 CDK5RAP1Q96SZ6 601 aaKnown RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 MRPL57Q9BQC6 102 aaKnown RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 SEZ6LQ9BYH1 1024 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 TCF7L2Q9NQB0 619 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 GMIPQ9P107 970 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
CLN8-212ENST00000637083 FBXO5Q9UKT4 447 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 ARHGAP26Q9UNA1 814 aa12.26□□□□□ -0.45
CLN8-212ENST00000637083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.25□□□□□ -0.45
CLN8-212ENST00000637083 DRGXA6NNA5 263 aa12.25□□□□□ -0.45
CLN8-212ENST00000637083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.25□□□□□ -0.45
CLN8-212ENST00000637083 H7C4K7 107 aa12.25□□□□□ -0.45
CLN8-212ENST00000637083 MATN2O00339 956 aa12.25□□□□□ -0.45
CLN8-212ENST00000637083 PHGDHO43175 533 aaKnown RBP12.25□□□□□ -0.45
CLN8-212ENST00000637083 NPHS1O60500 1241 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms