RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CAMKK1Q8N5S9 505 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 CNTD1Q8N815 330 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 HMGB4Q8WW32 186 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 HTR3CQ8WXA8 447 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 NKD2Q969F2 451 aaPredicted RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 FERMT1Q9BQL6 677 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 HEPHQ9BQS7 1158 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 CEP41Q9BYV8 373 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 MKRN2Q9H000 416 aaKnown RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 HAUS2Q9NVX0 235 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 ATP8A1Q9Y2Q0 1164 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 RNF103O00237 685 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 POP4O95707 220 aaKnown RBP16.22■□□□□ 0.19
CLN6-216ENST00000636876 HLA-DQB2P05538 268 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 C7P10643 843 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 TDGF1P13385 188 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 CR2P20023 1033 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 PTPN3P26045 913 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 CHRNA3P32297 505 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 NUBP1P53384 320 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 RPS14P62263 151 aaKnown RBP16.22■□□□□ 0.19
CLN6-216ENST00000636876 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
CLN6-216ENST00000636876 OASLQ15646 514 aaKnown RBP16.22■□□□□ 0.19
CLN6-216ENST00000636876 TEX44Q53QW1 395 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 ANO7Q6IWH7 933 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 DRICH1Q6PGQ1 229 aaPredicted RBP16.22■□□□□ 0.19
CLN6-216ENST00000636876 SRLQ86TD4 932 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 RASSF3Q86WH2 238 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 CREG2Q8IUH2 290 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 PRELID2Q8N945 189 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 OR6K2Q8NGY2 324 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 CAPZA3Q96KX2 299 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 MRGPRX1Q96LB2 322 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 SLC6A17Q9H1V8 727 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 ZDHHC6Q9H6R6 413 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 USP29Q9HBJ7 922 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 HOMER3Q9NSC5 361 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 IL36AQ9UHA7 158 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 EVLQ9UI08 416 aaPredicted RBP16.22■□□□□ 0.19
CLN6-216ENST00000636876 FBXO4Q9UKT5 387 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
CLN6-216ENST00000636876 CFAP69A5D8W1 941 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 KRIT1O00522 736 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 INSIG1O15503 277 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 KCNN4O15554 427 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PRNPP04156 253 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 CTSLP07711 333 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PSMD8P48556 350 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 MAXP61244 160 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 AP1S1P61966 158 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
CLN6-216ENST00000636876 RAD51Q06609 339 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 SNX1Q13596 522 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 CST6Q15828 149 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 ALG1LQ6GMV1 187 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 KIAA1324Q6UXG2 1013 aaKnown RBP16.21■□□□□ 0.19
CLN6-216ENST00000636876 MMAAQ8IVH4 418 aaKnown RBP16.21■□□□□ 0.19
CLN6-216ENST00000636876 TMIEQ8NEW7 156 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PRSS33Q8NF86 280 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 MDGA1Q8NFP4 955 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PIP4K2CQ8TBX8 421 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 GRIN3AQ8TCU5 1115 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PRCCQ92733 491 aaPredicted RBP16.21■□□□□ 0.19
CLN6-216ENST00000636876 VOPP1Q96AW1 172 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 TEKT5Q96M29 485 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 AGAP3Q96P47 875 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 NUDCD1Q96RS6 583 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PHOX2BQ99453 314 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 VAT1Q99536 393 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 POLR1EQ9GZS1 481 aaKnown RBP16.21■□□□□ 0.19
CLN6-216ENST00000636876 BCCIPQ9P287 314 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLN6-216ENST00000636876 RNF14Q9UBS8 474 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 EBF1Q9UH73 591 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 PPM1HQ9ULR3 514 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 TTLL3Q9Y4R7 772 aa16.21■□□□□ 0.19
CLN6-216ENST00000636876 C1QTNF3-AMACRE9PGA6 284 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 GALR2O43603 387 aaPredicted RBP16.2■□□□□ 0.18
CLN6-216ENST00000636876 LEFTY1O75610 366 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 GJB3O75712 270 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 STK10O94804 968 aaKnown RBP16.2■□□□□ 0.18
CLN6-216ENST00000636876 ADH1BP00325 375 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 IL1BP01584 269 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 GKP32189 559 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 MAPK8P45983 427 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 PXNP49023 591 aaPredicted RBP16.2■□□□□ 0.18
CLN6-216ENST00000636876 SCNN1BP51168 640 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 ZBTB16Q05516 673 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 ITKQ08881 620 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 GRM3Q14832 879 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 ARSIQ5FYB1 569 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 RALGPS1Q5JS13 557 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 FAM182AQ5T1J6 154 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 FAM46CQ5VWP2 391 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 TSSK4Q6SA08 328 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 CACUL1Q86Y37 369 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 ZNF567Q8N184 647 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms