RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 DUOXA1Q1HG43 343 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 TFDP3Q5H9I0 405 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 AFMIDQ63HM1 303 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 GDPD4Q6W3E5 623 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 ERN2Q76MJ5 926 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 SRLQ86TD4 932 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 PRPF39Q86UA1 669 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 SYT12Q8IV01 421 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 ARHGAP12Q8IWW6 846 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 KATNAL2Q8IYT4 538 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 NDUFAF2Q8N183 169 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 OR2T34Q8NGX1 318 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 HCAR2Q8TDS4 363 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 TSC1Q92574 1164 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 RAB7BQ96AH8 199 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 FEM1CQ96JP0 617 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 HSPA12BQ96MM6 686 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 ALS2CR12Q96Q35 445 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 DESI2Q9BSY9 194 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 CPEB1Q9BZB8 566 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 LACRTQ9GZZ8 138 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 KLC2Q9H0B6 622 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 ATP13A3Q9H7F0 1226 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 ETNK2Q9NVF9 386 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 AMACRQ9UHK6 382 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 MBD1Q9UIS9 605 aaPredicted RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 TFR2Q9UP52 801 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 REXO2Q9Y3B8 237 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 MFHAS1Q9Y4C4 1052 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 HYOU1Q9Y4L1 999 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 PCDHA3Q9Y5H8 950 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 HEY1Q9Y5J3 304 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 DUSP10Q9Y6W6 482 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 FANCMQ8IYD8 2048 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 THADAQ6YHU6 1953 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 CKAP5Q14008 2032 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 RCCD1A6NED2 376 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 GOLGA6L9A6NEM1 432 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 NEMP1O14524 444 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 MATN3O15232 486 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ZSCAN12O43309 604 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 MAFKO60675 156 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ZNF189O75820 626 aaPredicted RBP8.34□□□□□ -1.07
PNKP-226ENST00000636840 FSBPO95073 299 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 PCDH8O95206 1070 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ZNF806P0C7X5 589 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 KRT10P13645 584 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 CTNNA2P26232 953 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ACSL1P33121 698 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 MPLP40238 635 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 GARSP41250 739 aaKnown RBP8.34□□□□□ -1.07
PNKP-226ENST00000636840 SCNN1BP51168 640 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 CCR5P51681 352 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SUOXP51687 545 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 NEK3P51956 506 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ATXN3P54252 364 aaPredicted RBP8.34□□□□□ -1.07
PNKP-226ENST00000636840 BCL2L1Q07817 233 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ITKQ08881 620 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SPEM2Q0P670 501 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 CNTN1Q12860 1018 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 CSRP2Q16527 193 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SLC45A4Q5BKX6 768 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ZNF805Q5CZA5 627 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 RALGPS1Q5JS13 557 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 DCAF12L1Q5VU92 463 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 KAZNQ674X7 775 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 NCBP2-AS2Q69YL0 99 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 NEK5Q6P3R8 708 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 MFSD7Q6UXD7 560 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ARMCX6Q7L4S7 300 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 TTC7BQ86TV6 843 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ZSCAN30Q86W11 494 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 FRMD1Q8N878 549 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 CHST14Q8NCH0 376 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 GRIN3AQ8TCU5 1115 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SNX19Q92543 992 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 P3H4Q92791 437 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 FAF2Q96CS3 445 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ZNF641Q96N77 438 aaPredicted RBP8.34□□□□□ -1.07
PNKP-226ENST00000636840 TSGA13Q96PP4 275 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 PSKH2Q96QS6 385 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 TUBGCP5Q96RT8 1024 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 HDAC8Q9BY41 377 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 MIR1-1HGQ9H1L0 117 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 PREBQ9HCU5 417 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 SEMA4GQ9NTN9 838 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 KLHL11Q9NVR0 708 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 EVLQ9UI08 416 aaPredicted RBP8.34□□□□□ -1.07
PNKP-226ENST00000636840 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 ACTL7AQ9Y615 435 aa8.34□□□□□ -1.07
PNKP-226ENST00000636840 A0A1B0GTW7 788 aa8.33□□□□□ -1.08
PNKP-226ENST00000636840 C16orf96A6NNT2 1141 aa8.33□□□□□ -1.08
PNKP-226ENST00000636840 MTSS1O43312 755 aa8.33□□□□□ -1.08
PNKP-226ENST00000636840 CST8O60676 142 aa8.33□□□□□ -1.08
PNKP-226ENST00000636840 MAGEC1O60732 1142 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms