RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PSMB4P28070 264 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 NFE2Q16621 373 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 TAF2Q6P1X5 1199 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 P4HA3Q7Z4N8 544 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 GPR135Q8IZ08 494 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 METTL21AQ8WXB1 218 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 CENPIQ92674 756 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 VPS35Q96QK1 796 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 INTS7Q9NVH2 962 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 C3orf18Q9UK00 162 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF208O43345 1280 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 SKP1P63208 163 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ACAP1Q15027 740 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 UBE2R2Q712K3 238 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 APTXQ7Z2E3 356 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 SAMD9LQ8IVG5 1584 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 SUGP1Q8IWZ8 645 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 CCDC54Q8NEL0 328 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ARMC5Q96C12 935 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 NSMCE2Q96MF7 247 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 BARX2Q9UMQ3 279 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 A0A1W2PQC6 194 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 E5RJQ4 531 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 MDM4O15151 490 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ITPKAP23677 461 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 PDX1P52945 283 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 BNC1Q01954 994 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 FBXO42Q6P3S6 717 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 BPIFB6Q8NFQ5 453 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC9A6Q92581 669 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 NDRG1Q92597 394 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ZSWIM1Q9BR11 485 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 PAIP1Q9H074 479 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 CPSF4LA6NMK7 179 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 PLOD3O60568 738 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 CHAF1BQ13112 559 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 HIPK1Q86Z02 1210 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 FAR1Q8WVX9 515 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 LRRC39Q96DD0 335 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ELFN1P0C7U0 828 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 IRF8Q02556 426 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ACSM2AQ08AH3 577 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 FBXO48Q5FWF7 155 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ACSM2BQ68CK6 577 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 ART5Q96L15 291 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 COPS4Q9BT78 406 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 FAM192AQ9GZU8 254 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 EPHX1P07099 455 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 CYP3A4P08684 503 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF155Q12901 538 aaPredicted RBP18■□□□□ 0.47
CACNA1A-227ENST00000636549 SEMA5AQ13591 1074 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 TERF2Q15554 542 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 PCNX4Q63HM2 1172 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC27A1Q6PCB7 646 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 KBTBD2Q8IY47 623 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SERPINB11Q96P15 392 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 TNFRSF21O75509 655 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC35G4P0C7Q5 338 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 AQP1P29972 269 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 COLEC12Q5KU26 742 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF34Q8IZ26 560 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 MYLPFQ96A32 169 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 LENG1Q96BZ8 264 aaPredicted RBP18■□□□□ 0.47
CACNA1A-227ENST00000636549 BPIFA3Q9BQP9 254 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 H3BMM5 538 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 ZSCAN5DPP0CG00 497 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 CAPZA1P52907 286 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 CXorf57Q6NSI4 855 aaKnown RBP18■□□□□ 0.47
CACNA1A-227ENST00000636549 LRRC6Q86X45 466 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC22A9Q8IVM8 553 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 DNAJB14Q8TBM8 379 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 EEF1AKMT1Q8WVE0 214 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 FCRL4Q96PJ5 515 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 EPB41L1Q9H4G0 881 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 EIF4ENIF1Q9NRA8 985 aaKnown RBP18■□□□□ 0.47
CACNA1A-227ENST00000636549 STBD1O95210 358 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SSTR1P30872 391 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 IFNGR2P38484 337 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 TUFMP49411 452 aaKnown RBP18■□□□□ 0.47
CACNA1A-227ENST00000636549 OR52K1Q8NGK4 314 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 OSCP1Q8WVF1 389 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 KLHL4Q9C0H6 718 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 NCKIPSDQ9NZQ3 722 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 KCND2Q9NZV8 630 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC31A1O15431 190 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 MAGEB3O15480 346 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF432O94892 652 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 S100GP29377 79 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 FCHO2Q0JRZ9 810 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 HECTD3Q5T447 861 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 TXNRD3Q86VQ6 643 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 CFAP97Q9P2B7 532 aa18■□□□□ 0.47
CACNA1A-227ENST00000636549 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18■□□□□ 0.47
CACNA1A-227ENST00000636549 TPP1O14773 563 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 ECDO95905 644 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 OC90Q02509 493 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms