RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 CEP44Q9C0F1 390 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 MKRN2Q9H000 416 aaKnown RBP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 RSPH9Q9H1X1 276 aaPredicted RBP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 C10orf88Q9H8K7 445 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 FBRSQ9HAH7 460 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 NT5MQ9NPB1 228 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 SCUBE2Q9NQ36 999 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 DYRK4Q9NR20 520 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 PRMT8Q9NR22 394 aaPredicted RBP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 RBM22Q9NW64 420 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 HECAQ9UBI9 543 aaPredicted RBP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 LHX3Q9UBR4 397 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 SEPT3Q9UH03 358 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 IL36AQ9UHA7 158 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 RAPGEFL1Q9UHV5 662 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 EVLQ9UI08 416 aaPredicted RBP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 FBXO4Q9UKT5 387 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 CYP8B1Q9UNU6 501 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 NCKAP1Q9Y2A7 1128 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 HCN4Q9Y3Q4 1203 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 LRP4O75096 1905 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 PTPRZ1P23471 2315 aaPredicted RBP4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 WDR87Q6ZQQ6 2873 aa4.12□□□□□ -1.75
SMARCA2-248ENST00000636221 ARID1BQ8NFD5 2236 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 EP300Q09472 2414 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3DA0A087WVF3 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3IA0A087WXS9 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3EA0A087X179 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3KA0A087X1G2 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 CTAGE9A4FU28 777 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3FA6NER0 549 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PRR23AA6NEV1 266 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PCNX2A6NKB5 2137 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3LB9A6J9 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 C1QTNF3-AMACRE9PGA6 284 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 RNF103O00237 685 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 MCF2LO15068 1137 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 MUSKO15146 869 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ZNF185O15231 689 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ALOX15BO15296 676 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 KCNN4O15554 427 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 NDUFS2O75306 463 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ZNF217O75362 1048 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ZNF821O75541 412 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 GJB3O75712 270 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 RPP40O75818 363 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 STK10O94804 968 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PAPSS2O95340 614 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PIGNO95427 931 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 POP4O95707 220 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 GSRP00390 522 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 FGGP02679 453 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PRNPP04156 253 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 HLA-DQB2P05538 268 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 UGT2B4P06133 528 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 CTSLP07711 333 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3HP0C7X1 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 RBP3P10745 1247 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 C5AR1P21730 350 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 XPAP23025 273 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 RBL1P28749 1068 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PTPN7P35236 360 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 RGRP47804 291 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 VASPP50552 380 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TPMTP51580 245 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 NUBP1P53384 320 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 COPAP53621 1224 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 DSC2Q02487 901 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 BCL2L1Q07817 233 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PPIDQ08752 370 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ZBTB17Q13105 803 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 XRCC4Q13426 336 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 BYSLQ13895 437 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 HNRNPDQ14103 355 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 SIM2Q14190 667 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 RFTN1Q14699 578 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 NOMO1Q15155 1222 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 LPAL2Q16609 132 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TAZQ16635 292 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ZNF528Q3MIS6 628 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TTC31Q49AM3 519 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 SLC45A4Q5BKX6 768 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 LRRC73Q5JTD7 316 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 FAM46CQ5VWP2 391 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3GQ6DHY5 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TBC1D3CQ6IPX1 549 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 FBXL19Q6PCT2 694 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ZC3H14Q6PJT7 736 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 GDPD4Q6W3E5 623 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 SYT10Q6XYQ8 523 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 MAMSTRQ6ZN01 415 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 ARMCX6Q7L4S7 300 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 GSTA5Q7RTV2 222 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 PID1Q7Z2X4 250 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 KDELC2Q7Z4H8 507 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 SRLQ86TD4 932 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 TTC7BQ86TV6 843 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 WDR5BQ86VZ2 330 aa4.11□□□□□ -1.75
SMARCA2-248ENST00000636221 LONP2Q86WA8 852 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms