RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 IL1RAPL1Q9NZN1 696 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 CHMP5Q9NZZ3 219 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 C5AR2Q9P296 337 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 STK39Q9UEW8 545 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 FETUBQ9UGM5 382 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 IL19Q9UHD0 177 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 ZMYND8Q9ULU4 1186 aaPredicted RBP3.09□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM5Q9Y2B1 443 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 CCL27Q9Y4X3 112 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 CLDN16Q9Y5I7 305 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 SLC4A4Q9Y6R1 1079 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 COL11A2P13942 1736 aaPredicted RBP3.09□□□□□ -1.91
PSPC1-208ENST00000635562 MAP3K19Q56UN5 1328 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 SPATA31A6Q5VVP1 1343 aa3.09□□□□□ -1.91
PSPC1-208ENST00000635562 TRGV11A0A075B6L2 103 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 A0A0U1RQK1 487 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PIPSLA2A3N6 862 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF320A2RRD8 509 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 LRRIQ4A6NIV6 560 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 C16orf96A6NNT2 1141 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 A8MXE2 369 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 AGPSO00116 658 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 TRIM38O00635 465 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 EXOC3O60645 756 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CBFA2T3O75081 653 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PEX11AO75192 247 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 LETM1O95202 739 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PNPP00491 289 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PLGP00747 810 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CSF1P09603 554 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ACTN1P12814 892 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CSF2RAP15509 400 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PECAM1P16284 738 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SFPQP23246 707 aaKnown RBP eCLIP3.08□□□□□ -1.921e-7■□□□□ 8.6
PSPC1-208ENST00000635562 EEF1DP29692 281 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 GDI1P31150 447 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 MCM5P33992 734 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 IDUAP35475 653 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 DPP6P42658 865 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ACAA2P42765 397 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CLK3P49761 638 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CCR9P51686 369 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SEC24CP53992 1094 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 BCAT1P54687 386 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ACTR1AP61163 376 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 KCNJ10P78508 379 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 MC1RQ01726 317 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 UBE3AQ05086 875 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CHRNDQ07001 517 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 AIMP1Q12904 312 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 LRMPQ12912 555 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 STK4Q13043 487 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CBX3Q13185 183 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CUL4BQ13620 913 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 KCNAB1Q14722 419 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 TRIM71Q2Q1W2 868 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ADCK5Q3MIX3 580 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CCDC40Q4G0X9 1142 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 TCP11X2Q5H9J9 407 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CERCAMQ5T4B2 595 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CENPPQ6IPU0 288 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 RGS7BPQ6MZT1 257 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 MRNIPQ6NTE8 343 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 FBXO42Q6P3S6 717 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 TMEM154Q6P9G4 183 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 VWA1Q6PCB0 445 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CENPQQ7L2Z9 268 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 DGLUCYQ7Z3D6 616 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SZRD1Q7Z422 152 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 RABEPKQ7Z6M1 372 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CHD1LQ86WJ1 897 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 C2CD5Q86YS7 1000 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SLC15A3Q8IY34 581 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ABRAQ8N0Z2 381 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 HDDC3Q8N4P3 179 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 DPP10Q8N608 796 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 TRIML2Q8N7C3 387 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ZBTB8BQ8NAP8 495 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SPATA20Q8TB22 786 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 DNAJB14Q8TBM8 379 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ASB10Q8WXI3 467 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ATG4AQ8WYN0 398 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 LPIN2Q92539 896 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CASP10Q92851 521 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PPP2R3CQ969Q6 453 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 FAM120BQ96EK7 910 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PDLIM5Q96HC4 596 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF668Q96K58 619 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 CNOT6LQ96LI5 555 aaKnown RBP3.08□□□□□ -1.92
PSPC1-208ENST00000635562 GAL3ST1Q99999 423 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 TUBA1CQ9BQE3 449 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 ITPAQ9BY32 194 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 WDR11Q9BZH6 1224 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 KRT23Q9C075 422 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 PCDHAC1Q9H158 963 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 HSD3B7Q9H2F3 369 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 DNAJC18Q9H819 358 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SNTG1Q9NSN8 517 aa3.08□□□□□ -1.92
PSPC1-208ENST00000635562 SEPT11Q9NVA2 429 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms