RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 NSUN2Q08J23 767 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 TFDP2Q14188 446 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 GSE1Q14687 1217 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 LBRQ14739 615 aaKnown RBP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 PPP2R5EQ16537 467 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 ARSIQ5FYB1 569 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 SYCP2LQ5T4T6 812 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 ATXN7L2Q5T6C5 722 aaPredicted RBP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 MFSD7Q6UXD7 560 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 SPOCD1Q6ZMY3 1216 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 CYP2U1Q7Z449 544 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 RFX6Q8HWS3 928 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 RYBPQ8N488 228 aaPredicted RBP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 GPR161Q8N6U8 529 aaKnown RBP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 KRT35Q92764 455 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 HDAC11Q96DB2 347 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 TSGA13Q96PP4 275 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 PSKH2Q96QS6 385 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 TUBGCP5Q96RT8 1024 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 HINFPQ9BQA5 517 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 HDAC8Q9BY41 377 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 CPEB1Q9BZB8 566 aaKnown RBP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 DTLQ9NZJ0 730 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 SEPT3Q9UH03 358 aa14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 TPX2Q9ULW0 747 aaKnown RBP14.97□□□□□ -0.01
CDC42BPB-209ENST00000634889 LRRC72A6NJI9 287 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 PLRG1O43660 514 aaKnown RBP14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 FOXD2O60548 495 aaPredicted RBP14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 CCNCP24863 283 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 MPLP40238 635 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 RWDD2BP57060 319 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 CREB5Q02930 508 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 GBE1Q04446 702 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 SLC10A7Q0GE19 358 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 CNTN1Q12860 1018 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 ZNF805Q5CZA5 627 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 WDR45BQ5MNZ6 344 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 PLA2G2CQ5R387 149 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 AGBL4Q5VU57 503 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 PEAR1Q5VY43 1037 aaPredicted RBP14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 ALYREFQ86V81 257 aaKnown RBP14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 SLC41A1Q8IVJ1 513 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 TSEN2Q8NCE0 465 aaKnown RBP14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 OR2T34Q8NGX1 318 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 OR6K2Q8NGY2 324 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 VOPP1Q96AW1 172 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 ARRDC1-AS1Q9H2J1 176 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 HAUS2Q9NVX0 235 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 AMFRQ9UKV5 643 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 EFR3BQ9Y2G0 817 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 CAPN6Q9Y6Q1 641 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 ABCA7Q8IZY2 2146 aa14.96□□□□□ -0.01
CDC42BPB-209ENST00000634889 hCG_1818297A0A087WSY0 165 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 MEI4A8MW99 385 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 TGM2P21980 687 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 MAPK8P45983 427 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 NR2C2P49116 596 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 PEX5P50542 639 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 NEK3P51956 506 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 SLC10A2Q12908 348 aaPredicted RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 HNRNPDQ14103 355 aaKnown RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 ZNF235Q14590 738 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 PDK1Q15118 436 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 POM121L1PQ3SYA9 428 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 PIP5KL1Q5T9C9 394 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 MARC1Q5VT66 337 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 ERN2Q76MJ5 926 aaKnown RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 BZW1Q7L1Q6 419 aaKnown RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 ARMCX6Q7L4S7 300 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 RABEPKQ7Z6M1 372 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 SYT12Q8IV01 421 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 CCDC50Q8IVM0 306 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 DEFB119Q8N690 84 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 TEX26Q8N6G2 289 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 UBL4BQ8N7F7 174 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 OR14C36Q8NHC7 312 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 DNASE2BQ8WZ79 361 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 ARRDC3Q96B67 414 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 EXOC2Q96KP1 924 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 OLFM3Q96PB7 478 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 MGME1Q9BQP7 344 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 BRD8Q9H0E9 1235 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 PREBQ9HCU5 417 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 VPS45Q9NRW7 570 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 AMACRQ9UHK6 382 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 EVLQ9UI08 416 aaPredicted RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 PILRBQ9UKJ0 227 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 GUCA1BQ9UMX6 200 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 HEY1Q9Y5J3 304 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 WDR87Q6ZQQ6 2873 aa14.95□□□□□ -0.02
CDC42BPB-209ENST00000634889 SHROOM3Q8TF72 1996 aa14.94□□□□□ -0.02
CDC42BPB-209ENST00000634889 ZFHX2Q9C0A1 2572 aaPredicted RBP14.94□□□□□ -0.02
CDC42BPB-209ENST00000634889 C10orf142B7Z368 130 aa14.94□□□□□ -0.02
CDC42BPB-209ENST00000634889 RNF103O00237 685 aa14.94□□□□□ -0.02
CDC42BPB-209ENST00000634889 PLK4O00444 970 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms