RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SYT11Q9BT88 431 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 STRA6Q9BX79 667 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PACSIN1Q9BY11 444 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ST6GALNAC4Q9H4F1 302 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SPHK2Q9NRA0 654 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 TMEM59LQ9UK28 342 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PILRBQ9UKJ0 227 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 EMC9Q9Y3B6 208 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF451Q9Y4E5 1061 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 BZW2Q9Y6E2 419 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 FAM149AA5PLN7 773 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 LINC01387J3KSC0 135 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 KCNK3O14649 394 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 OAS1P00973 400 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 TYRP14679 529 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 RPL13P26373 211 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 CXCR5P32302 372 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 NUMBP49757 651 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PGFP49763 221 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 HNRNPH2P55795 449 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 SLC7A9P82251 487 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 C19orf57Q0VDD7 668 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 STARD3Q14849 445 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 POU4F3Q15319 338 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 EXOC3L4Q17RC7 722 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 COL28A1Q2UY09 1125 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 C10orf120Q5SQS8 335 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SYCP2LQ5T4T6 812 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 LAYNQ6UX15 382 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SLC41A1Q8IVJ1 513 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF366Q8N895 744 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 C12orf29Q8N999 325 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 CXorf38Q8TB03 319 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 GOLGA5Q8TBA6 731 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SLC2A14Q8TDB8 520 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 TMEM174Q8WUU8 243 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 TOE1Q96GM8 510 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 SPATA17Q96L03 361 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SPOCK3Q9BQ16 436 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 B3GNT5Q9BYG0 378 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 GDF3Q9NR23 364 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 DMAC2Q9NW81 257 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ZIM2Q9NZV7 527 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 KLHL3Q9UH77 587 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 RAXQ9Y2V3 346 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 NME7Q9Y5B8 376 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 NUP210Q8TEM1 1887 aaPredicted RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 LRRK2Q5S007 2527 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SPTBN1Q01082 2364 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 GFPT2O94808 682 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SYPP08247 313 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SERPINF2P08697 491 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 FTH1P19P0C7X4 201 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 EPB41P11171 864 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 GNSP15586 552 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 CD58P19256 250 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 WARSP23381 471 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 TNNT3P45378 269 aaPredicted RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 MAP7Q14244 749 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SETDB1Q15047 1291 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF667Q5HYK9 610 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PRAMEF14Q5SWL7 426 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 DENND5AQ6IQ26 1287 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 CCDC70Q6NSX1 233 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 EMBQ6PCB8 327 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 GBP6Q6ZN66 633 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 C1orf229Q6ZS94 237 aaPredicted RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 SLFN11Q7Z7L1 901 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SORCS1Q8WY21 1168 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 KLHDC7BQ96G42 594 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 XPO6Q96QU8 1125 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 IL21RQ9HBE5 538 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 DMAP1Q9NPF5 467 aaPredicted RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 EIF2B4Q9UI10 523 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 LSM7Q9UK45 103 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 A0A0A6YYK5 440 aaPredicted RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 IGHV1OR15-9A0A0B4J2B8 117 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 E2F8A0AVK6 867 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PRAMEF27A3QJZ7 478 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PRRT4C9JH25 899 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 TMPRSS2O15393 492 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SYNCRIPO60506 623 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SHOX2O60902 331 aaPredicted RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 RTN3O95197 1032 aaPredicted RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 FTCDO95954 541 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 ACTN2P35609 894 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PAFAH1B1P43034 410 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 LMAN1P49257 510 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 DGKGP49619 791 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SUMO1P63165 101 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SEMA3BQ13214 749 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SURF1Q15526 300 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 ANKRD39Q53RE8 183 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 HSP90B2PQ58FF3 399 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SPOPLQ6IQ16 392 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SLC23A3Q6PIS1 610 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 TRMT11Q7Z4G4 463 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 WDR49Q8IV35 697 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 XXYLT1Q8NBI6 393 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SLC30A5Q8TAD4 765 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms