RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
DDX41-219ENST00000629036 LEFTY1O75610 366 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 NDUFA10O95299 355 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 DESP17661 470 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 TAZQ16635 292 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
DDX41-219ENST00000629036 POM121L1PQ3SYA9 428 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 ACCSLQ4AC99 568 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 ATXN7L2Q5T6C5 722 aaPredicted RBP11.29□□□□□ -0.6
DDX41-219ENST00000629036 NCBP2-AS2Q69YL0 99 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 PARS2Q7L3T8 475 aaKnown RBP11.29□□□□□ -0.6
DDX41-219ENST00000629036 RHOT2Q8IXI1 618 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
DDX41-219ENST00000629036 OR2AP1Q8NGE2 309 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 OR2T34Q8NGX1 318 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 OR6K2Q8NGY2 324 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 GRIN3AQ8TCU5 1115 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 FOXJ1Q92949 421 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 ZNF670Q9BS34 389 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 HDAC8Q9BY41 377 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 IL36AQ9UHA7 158 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 PCDHA13Q9Y5I0 950 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 ADAMTS20P59510 1910 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 TSPAN11A1L157 253 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 ZNF487B1APH4 448 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 WNT9AO14904 365 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 INSIG1O15503 277 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 BUB1O43683 1085 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 BUB1BO60566 1050 aaPredicted RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 MAFKO60675 156 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 NDUFS2O75306 463 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 GJB3O75712 270 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 KCNK5O95279 499 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 SERPINF2P08697 491 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 ITGB7P26010 798 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 ABL2P42684 1182 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 MARCKSL1P49006 195 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 CDH6P55285 790 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 GEMIN4P57678 1058 aaKnown RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 SLC10A2Q12908 348 aaPredicted RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 FOXC1Q12948 553 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 MESDQ14696 234 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 PAFAH1B3Q15102 231 aaKnown RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 TRIM61Q5EBN2 209 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 ARSIQ5FYB1 569 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 KIAA0895LQ68EN5 471 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 PSAPL1Q6NUJ1 521 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 DSG4Q86SJ6 1040 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 ACRBPQ8NEB7 543 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 HEPHQ9BQS7 1158 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 LACRTQ9GZZ8 138 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 IMPACTQ9P2X3 320 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 HYOU1Q9Y4L1 999 aa11.28□□□□□ -0.6
DDX41-219ENST00000629036 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
DDX41-219ENST00000629036 ARHGAP42A6NI28 874 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 SRRM3A6NNA2 597 aaPredicted RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 TMEM110-MUSTN1A8MSY1 372 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 BTNL10A8MVZ5 291 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 C1QTNF3-AMACRE9PGA6 284 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 PJA2O43164 708 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 BNIP3LO60238 219 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 PRNPP04156 253 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 CR2P20023 1033 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 ARL4AP40617 200 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 DPP6P42658 865 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 MAGEA1P43355 309 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 CCR5P51681 352 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 IL10RBQ08334 325 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 GALNT2Q10471 571 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 IHHQ14623 411 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 DUOXA1Q1HG43 343 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 ANKRD20A8PQ5CZ79 823 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 LRRC38Q5VT99 294 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 TRIM69Q86WT6 500 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 ZSWIM9Q86XI8 627 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 PGBD5Q8N414 524 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 LZTR1Q8N653 840 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 PLD5Q8N7P1 536 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 EXOC2Q96KP1 924 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 OMDQ99983 421 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 KDM4CQ9H3R0 1056 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 TM9SF3Q9HD45 589 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms